RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SLC25A10Q9UBX3 287 aaPredicted RBP16.65■□□□□ 0.26
SHANK1-203ENST00000391813 A0A1B0GUT8 65 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 FAM157AC9JC47 383 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 SEC11AP67812 179 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 TMEM78Q5T7P6 136 aa16.65■□□□□ 0.26
SHANK1-203ENST00000391813 PROB1E7EW31 1015 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 CELA2AP08217 269 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 Q6AWC8 147 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 KIF26BQ2KJY2 2108 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 TEX38Q6PEX7 206 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 PEX7O00628 323 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 IGHV2-70P01814 119 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 HIST1H1AQ02539 215 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-203ENST00000391813 ZNF664Q8N3J9 261 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 ACACAQ13085 2346 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 RBFOX2O43251 390 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHANK1-203ENST00000391813 STAG3L3P0CL85 134 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 OR4X2Q8NGF9 303 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 TMEM208Q9BTX3 173 aa16.64■□□□□ 0.25
SHANK1-203ENST00000391813 A6NNC1 897 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 NAPSAO96009 420 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 ACSF3Q4G176 576 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-203ENST00000391813 NUDT11Q96G61 164 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 ICE1Q9Y2F5 2266 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 H3BUT2 72 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 REG1BP48304 166 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 ZNF257Q9Y2Q1 563 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 IGKV1-9A0A0C4DH69 117 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 SYNGR3O43761 229 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 APOHP02749 345 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-203ENST00000391813 ZNF826PQ6ZT77 177 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 OR4A5Q8NH83 315 aa16.63■□□□□ 0.25
SHANK1-203ENST00000391813 EAF1Q96JC9 268 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-203ENST00000391813 NDUFS8O00217 210 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 ZIC3O60481 467 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 IGHV3-21A0A0B4J1V1 117 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 COX6B1P14854 86 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 NPIPB3Q92617 1050 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 MRPL13Q9BYD1 178 aaKnown RBP16.62■□□□□ 0.25
SHANK1-203ENST00000391813 RPP21Q9H633 154 aaKnown RBP16.62■□□□□ 0.25
SHANK1-203ENST00000391813 A8MWP6 167 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 GZMBP10144 247 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 CTSSP25774 331 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 IFNL4K9M1U5 179 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 ATXN7O15265 892 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-203ENST00000391813 ATP5LO75964 103 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 PSG9Q00887 426 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 NRN1LQ496H8 165 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 IDI2-AS1Q9NZ38 188 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 CEP250Q9BV73 2442 aa16.62■□□□□ 0.25
SHANK1-203ENST00000391813 NBEAP1P0C6P0 100 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 FOXL2P58012 376 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 OR2K2Q8NGT1 345 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 RBPMS2Q6ZRY4 209 aaKnown RBP16.61■□□□□ 0.25
SHANK1-203ENST00000391813 TMUB1Q9BVT8 246 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 CTSBP07858 339 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 HCP5Q6MZN7 132 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 GOLT1AQ6ZVE7 132 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 LINC00470Q9BZP3 86 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 TRAV30A0A087WSZ9 112 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 OR4C13Q8NGP0 309 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 PRELID3AQ96N28 172 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 SIGMAR1Q99720 223 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 AGMATQ9BSE5 352 aa16.61■□□□□ 0.25
SHANK1-203ENST00000391813 C12orf77C9JDV5 145 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 TIAF1O95411 115 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 ANOS1P23352 680 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 CACNG8Q8WXS5 425 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 DIRC2Q96SL1 478 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 MEGF9Q9H1U4 602 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 IFI27L2Q9H2X8 130 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 PPIAL4EA0A075B759 164 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 A0A0A6YYD4 124 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 PPIAL4DF5H284 164 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 PPIAL4FP0DN26 164 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 AMMECR1LQ6DCA0 310 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 CCDC144NLQ6NUI1 221 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 OCC1Q8TAD7 63 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 ORAOV1Q8WV07 137 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 PPIAL4AQ9Y536 164 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 IGKV3D-11A0A0A0MRZ8 115 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 PLPPR1Q8TBJ4 325 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 CACNA1HO95180 2353 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 APELAP0DMC3 54 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 GPR82Q96P67 336 aa16.6■□□□□ 0.25
SHANK1-203ENST00000391813 UMODP07911 640 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 CD59P13987 128 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 TDGF1P3P51864 188 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 UBE2V1Q13404 147 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 SGK494Q96LW2 274 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 MS4A6AQ9H2W1 248 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 HIGD1CA8MV81 97 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 KHDC1LQ5JSQ8 128 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 ACTL10Q5JWF8 245 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 C17orf98A8MV24 154 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 RELQ04864 619 aaPredicted RBP16.59■□□□□ 0.25
SHANK1-203ENST00000391813 MRPL16Q9NX20 251 aaKnown RBP16.59■□□□□ 0.25
SHANK1-203ENST00000391813 WDR83OSQ9Y284 106 aa16.59■□□□□ 0.25
SHANK1-203ENST00000391813 TRAV8-6A0A0B4J262 113 aa16.58■□□□□ 0.25
SHANK1-203ENST00000391813 IGKV1D-13A0A0B4J2D9 117 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms