RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 QTRT1Q9BXR0 403 aaKnown RBP12.57□□□□□ -0.4
SNRPB-201ENST00000381342 GNB4Q9HAV0 340 aa12.57□□□□□ -0.4
SNRPB-201ENST00000381342 TMEM14BQ9NUH8 114 aa12.57□□□□□ -0.4
SNRPB-201ENST00000381342 KCNIP3Q9Y2W7 256 aa12.57□□□□□ -0.4
SNRPB-201ENST00000381342 IGLC7A0M8Q6 106 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 G3V4G9 280 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 H3BUA1 57 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 RBMXL2O75526 392 aaKnown RBP12.56□□□□□ -0.4
SNRPB-201ENST00000381342 PRH1P02810 166 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 ANXA3P12429 323 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 CDX1P47902 265 aaPredicted RBP12.56□□□□□ -0.4
SNRPB-201ENST00000381342 DEFA1P59665 94 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 DEFA3P59666 94 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 ASAH1Q13510 395 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 DEFB136Q30KP8 78 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 ETV3LQ6ZN32 361 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 SLC25A42Q86VD7 318 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 SLC35G3Q8N808 338 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 ZNF491Q8N8L2 437 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 OR10W1Q8NGF6 305 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
SNRPB-201ENST00000381342 TMEM56Q96MV1 263 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 C20orf85Q9H1P6 137 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 TMEM56-RWDD3S4R434 201 aa12.56□□□□□ -0.4
SNRPB-201ENST00000381342 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 ANXA7P20073 488 aaKnown RBP12.55□□□□□ -0.4
SNRPB-201ENST00000381342 SLC6A1P30531 599 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 ANKRD55Q3KP44 614 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 TTC9CQ8N5M4 171 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 C4orf3Q8WVX3 66 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 UBE2E2Q96LR5 201 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 SLA2Q9H6Q3 261 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 NDUFA4L2Q9NRX3 87 aa12.55□□□□□ -0.4
SNRPB-201ENST00000381342 A0A0B4J293 547 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 NPIPB5A8MRT5 1133 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 SFT2D2O95562 160 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 IGHV3-11P01762 117 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 TCRBP04435 133 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 PSMB6P28072 239 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
SNRPB-201ENST00000381342 SRPXP78539 464 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 SAMD5Q5TGI4 173 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 FAM219AQ8IW50 185 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 LGI3Q8N145 548 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
SNRPB-201ENST00000381342 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 FKBP11Q9NYL4 201 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
SNRPB-201ENST00000381342 TRAV6A0A075B6T7 132 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
SNRPB-201ENST00000381342 CTRB1P17538 263 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 MECP2P51608 486 aaKnown RBP12.53□□□□□ -0.4
SNRPB-201ENST00000381342 WT1-ASQ06250 92 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 BEAN1Q3B7T3 259 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
SNRPB-201ENST00000381342 Q6ZRM9 215 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 REC114Q7Z4M0 266 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 LSM10Q969L4 123 aaKnown RBP12.53□□□□□ -0.4
SNRPB-201ENST00000381342 GPR146Q96CH1 333 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
SNRPB-201ENST00000381342 CACNG5Q9UF02 275 aa12.53□□□□□ -0.4
SNRPB-201ENST00000381342 A0A0B4J2A0 478 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 C9orf170A2RU37 121 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 I3L521 148 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 BRI3O95415 125 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 DUS4LO95620 317 aaKnown RBP12.52□□□□□ -0.41
SNRPB-201ENST00000381342 PTTG1O95997 202 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 CRYGCP07315 174 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 OR4E1P0C645 316 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 OR13C7P0DN81 318 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 RHOGP84095 191 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 PRCDQ00LT1 54 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 DHRS2Q13268 280 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 RGS21Q2M5E4 152 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 OXLD1Q5BKU9 147 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 WFDC9Q8NEX5 89 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 SHPKQ9UHJ6 478 aa12.52□□□□□ -0.41
SNRPB-201ENST00000381342 TRBV9A0A0B4J1U6 114 aa12.51□□□□□ -0.41
SNRPB-201ENST00000381342 C13orf42A0A1B0GVH6 325 aa12.51□□□□□ -0.41
SNRPB-201ENST00000381342 OR2J3O76001 311 aa12.51□□□□□ -0.41
SNRPB-201ENST00000381342 LGALS1P09382 135 aaKnown RBP12.51□□□□□ -0.41
SNRPB-201ENST00000381342 HSPE1P61604 102 aaKnown RBP12.51□□□□□ -0.41
SNRPB-201ENST00000381342 C4orf46Q504U0 113 aa12.51□□□□□ -0.41
SNRPB-201ENST00000381342 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
SNRPB-201ENST00000381342 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
SNRPB-201ENST00000381342 RCC1LQ96I51 464 aaKnown RBP12.51□□□□□ -0.41
SNRPB-201ENST00000381342 FANCD2OSQ96PS1 177 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms