RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PDPNQ86YL7 162 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 CYB561D1Q8N8Q1 229 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 OR5AN1Q8NGI8 311 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 OR5B3Q8NH48 314 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 OR9G1Q8NH87 305 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 VSTM2AQ8TAG5 236 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 LINC01560Q8TB33 94 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM204Q9BSN7 226 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 NPVFQ9HCQ7 196 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 CTSZQ9UBR2 303 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 PUS1Q9Y606 427 aaKnown RBP eCLIP8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 PCNX1Q96RV3 2341 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 J3QR06 171 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 RRHO14718 337 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 FCN3O75636 299 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 IGKV1D-33P01593 117 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 IGKV1-33P01594 117 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 RBP4P02753 201 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 IFNA4P05014 189 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 CDC34P49427 236 aaPredicted RBP8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 PSMB3P49720 205 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 ADORA2A-AS1P86434 159 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 OR10X1Q8NGY0 326 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 CA5BP1Q8WTZ4 195 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 PLEKHA3Q9HB20 300 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 SIRT7Q9NRC8 400 aa8.54□□□□□ -1.04
POLR2J3-201ENST00000379340 SMCO3A2RU48 225 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 CXorf65A6NEN9 183 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 H0YJW9 148 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM250H0YL14 139 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 PLAUP00749 431 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 USF1P22415 310 aaPredicted RBP8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 MC5RP33032 325 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 MAS1LP35410 378 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 RAB13P51153 203 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 FGF8P55075 233 aaPredicted RBP8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 RAB31Q13636 194 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 TET2Q6N021 2002 aaPredicted RBP8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 Q8N7P7 452 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 HARBI1Q96MB7 349 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 NABP2Q9BQ15 211 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 MRPL20Q9BYC9 149 aaKnown RBP8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 SLC25A22Q9H936 323 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 YLPM1P49750 1951 aaKnown RBP8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 DOCK11Q5JSL3 2073 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 SPG11Q96JI7 2443 aa8.53□□□□□ -1.04
POLR2J3-201ENST00000379340 CA2P00918 260 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 IGHV2-70P01814 119 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 SAA1P0DJI8 122 aaPredicted RBP8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 IGHV1-8P0DP01 117 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 CTRB1P17538 263 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 RAB5BP61020 215 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 RPS16P62249 146 aaKnown RBP8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 MEF2BQ02080 365 aaPredicted RBP8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 C2orf83Q53S99 150 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 FAM90A2PQ658T7 463 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 CTRB2Q6GPI1 263 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 ABHD12Q8N2K0 398 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 OR4C13Q8NGP0 309 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 OR1L8Q8NGR8 309 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM167AQ8TBQ9 72 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM170AQ8WVE7 144 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 RAB24Q969Q5 203 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 ST6GALNAC6Q969X2 333 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 HIST1H2BAQ96A08 127 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 FLYWCH2Q96CP2 140 aaKnown RBP8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 TXNDC17Q9BRA2 123 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 C20orf24Q9BUV8 137 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 RAB1BQ9H0U4 201 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 PRELID1Q9Y255 219 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 WASHC3Q9Y3C0 194 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 LSM4Q9Y4Z0 139 aaKnown RBP8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 FBN3Q75N90 2809 aa8.52□□□□□ -1.04
POLR2J3-201ENST00000379340 AKAP9Q99996 3911 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 TACC2O95359 2948 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 ARFGEF3Q5TH69 2177 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 TEX50A0A1B0GTY4 177 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 A0A1W2PN81 502 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 A0A1W2PPV4 95 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 SIAH2O43255 324 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 IGKV1-16P04430 117 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 CRYBA1P05813 215 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 CHRNA7P36544 502 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 CEBPGP53567 150 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 TEPPQ6URK8 271 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 TGIF2LXQ8IUE1 241 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 C8orf46Q8TAG6 207 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 MALSU1Q96EH3 234 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 GGTLC1Q9BX51 225 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 TMEM133Q9H2Q1 129 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 CBLN4Q9NTU7 201 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 MIOXQ9UGB7 285 aa8.52□□□□□ -1.05
POLR2J3-201ENST00000379340 hCG_1809904A0A1W2PP81 198 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 A0A1W2PPE2 198 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 A0A1W2PR64 198 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 A0A1W2PRV1 198 aa8.51□□□□□ -1.05
POLR2J3-201ENST00000379340 SRRM4A7MD48 611 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms