RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CSRP2Q16527 193 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 PRELID3AQ96N28 172 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 DUX3Q96PT4 197 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 GDF15Q99988 308 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 CSRP3P50461 194 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 ARPC1AQ92747 370 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 ZNF414Q96IQ9 312 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 MRPS16Q9Y3D3 137 aaKnown RBP18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 TM4SF5O14894 197 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 KBTBD11-OT1A0A1B0GTJ5 212 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 TMEM101Q96IK0 257 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 IMMP2LQ96T52 175 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 STRCP1A6NGW2 1772 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 PSG7Q13046 419 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 PIKFYVEQ9Y2I7 2098 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 LDLRAD4O15165 306 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 EFEMP2O95967 443 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 RTBDNQ9BSG5 229 aaPredicted RBP18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 WNT10AQ9GZT5 417 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 SCN2AQ99250 2005 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 GATA2P23769 480 aaPredicted RBP18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 RNASE4P34096 147 aaKnown RBP18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 GP6Q9HCN6 339 aa18.67■□□□□ 0.58
TM9SF3-201ENST00000371142 MPTX1A8MV57 137 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 PEX7O00628 323 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 ATP5IP56385 69 aaPredicted RBP18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 GPX4P36969 197 aaPredicted RBP18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 NUTF2P61970 127 aaKnown RBP18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 C1QTNF5Q9BXJ0 243 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 C21orf62Q9NYP8 219 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 ATP5G3P48201 142 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 FAM57AQ8TBR7 257 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 FAM168AQ92567 244 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 PAPPA-AS1Q5QFB9 102 aa18.66■□□□□ 0.58
TM9SF3-201ENST00000371142 APOHP02749 345 aaPredicted RBP18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 DNAL4O96015 105 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 MIR17HGQ75NE6 70 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 OR11H12B2RN74 326 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 SNAI2O43623 268 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 IGHV3-11P01762 117 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 TBR1Q16650 682 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 OR11H1Q8NG94 326 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 OR11H2Q8NH07 326 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 OR52E5Q8NH55 327 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 NEU4Q8WWR8 484 aaPredicted RBP18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 IL36BQ9NZH7 164 aa18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.65■□□□□ 0.58
TM9SF3-201ENST00000371142 RP1P56715 2156 aa18.64■□□□□ 0.58
TM9SF3-201ENST00000371142 TMEM250H0YL14 139 aa18.64■□□□□ 0.58
TM9SF3-201ENST00000371142 CDKN1AP38936 164 aa18.64■□□□□ 0.58
TM9SF3-201ENST00000371142 SDHCQ99643 169 aaPredicted RBP18.64■□□□□ 0.58
TM9SF3-201ENST00000371142 SMIM13P0DJ93 91 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 C9orf106Q8NAJ2 232 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 PMCHL2Q9BQD1 86 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 DPRXA6NFQ7 191 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 VENTXO95231 258 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 A0A0G2JK05 382 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 REC114Q7Z4M0 266 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 DMRTA2Q96SC8 542 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 C7orf69Q9H7B7 122 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 SEMA5BQ9P283 1151 aa18.64■□□□□ 0.57
TM9SF3-201ENST00000371142 EFNB1P98172 346 aa18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 GGACTQ9BVM4 153 aa18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 TTC32Q5I0X7 151 aa18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 RTN4RL2Q86UN3 420 aa18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 TMEM183AQ8IXX5 376 aa18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 C1orf162Q8NEQ5 155 aaPredicted RBP18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 ALKBH7Q9BT30 221 aaPredicted RBP18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 AICDAQ9GZX7 198 aa18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 OTOFQ9HC10 1997 aa18.63■□□□□ 0.57
TM9SF3-201ENST00000371142 WDYHV1Q96HA8 205 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 A0A0G2JLM5 398 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 TFF1P04155 84 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 SCGB3A1Q96QR1 104 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 H7C1H1 209 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 CCL3L1P16619 93 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 CTAG1AP78358 180 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 ST6GALNAC3Q8NDV1 305 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 ST6GALNAC6Q969X2 333 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 PTPRFP10586 1907 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 HTN3P15516 51 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 UCP1P25874 307 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 FMC1Q96HJ9 113 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 PLPPR1Q8TBJ4 325 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 LINC01587Q99440 93 aa18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 TNS1Q9HBL0 1735 aaKnown RBP18.62■□□□□ 0.57
TM9SF3-201ENST00000371142 FOXC2Q99958 501 aa18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 REPIN1Q9BWE0 567 aaKnown RBP18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 ZNF418Q8TF45 676 aaPredicted RBP18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 Q9H3A6 140 aa18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 MRPL16Q9NX20 251 aaKnown RBP18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 UMODP07911 640 aa18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 C14orf144Q96I85 54 aa18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 RPP21Q9H633 154 aaKnown RBP18.61■□□□□ 0.57
TM9SF3-201ENST00000371142 IQCF6A8MYZ5 107 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 TBL2Q9Y4P3 447 aaKnown RBP18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 TSPAN13O95857 204 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 TGFAP01135 160 aa18.6■□□□□ 0.57
TM9SF3-201ENST00000371142 C17orf100A8MU93 164 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms