RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 OSTCQ9NRP0 149 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 K7ESF4 209 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 LRRC10Q5BKY1 277 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 ACP1P24666 158 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 PTGDSP41222 190 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 Q6ZRM9 215 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 ZNF430Q9H8G1 570 aaPredicted RBP13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 ALPK3Q96L96 1907 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 IGHV3-21A0A0B4J1V1 117 aa13.44□□□□□ -0.26
CLSTN1-201ENST00000361311 KRTCAP3Q53RY4 240 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 PNKDQ8N490 385 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 ORAOV1Q8WV07 137 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 PLXNA4Q9HCM2 1894 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 TMPRSS2O15393 492 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 APELAP0DMC3 54 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 PRRX1P54821 245 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 CLEC1BQ9P126 229 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 F11RQ9Y624 299 aaKnown RBP13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 MYO7BQ6PIF6 2116 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 ZNF318Q5VUA4 2279 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 A0A1W2PR77 199 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 WNT9BO14905 357 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 REG1BP48304 166 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 LEAP2Q969E1 77 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 IGLV3-32A0A0A0MS00 114 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 E9PLN8 166 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 WISP1O95388 367 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 LINC00271P0C7V0 271 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 C3orf79P0CE67 100 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 LCN12Q6JVE5 192 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 JPT1Q9UK76 154 aa13.43□□□□□ -0.26
CLSTN1-201ENST00000361311 A1L4Q6 167 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 DLL1O00548 723 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 LGALS4P56470 323 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 SRSF7Q16629 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 LYRM7Q5U5X0 104 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 SSBP4Q9BWG4 385 aaPredicted RBP13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 GPX1P07203 203 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 RPL39P5Q59GN2 51 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 WFDC8Q8IUA0 241 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 FAM222BQ8WU58 562 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 DOCK7Q96N67 2140 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 RFPL3SP0C7P2 107 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 STAG3L2P0CL84 134 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 STAG3L3P0CL85 134 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 CALYQ9NYX4 217 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 ROS1P08922 2347 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 TTC28Q96AY4 2481 aa13.42□□□□□ -0.26
CLSTN1-201ENST00000361311 COX6A1P12074 109 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 Q1RN00 199 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 TTTY12Q9BZ98 90 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 AKIRIN1Q9H9L7 192 aaPredicted RBP13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 ZNF785A8K8V0 405 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 HIGD1CA8MV81 97 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 RPL8P62917 257 aaKnown RBP13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 RASL11BQ9BPW5 248 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 IGHV3-48P01763 117 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 ZNF146Q15072 292 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 SCGB1D4Q6XE38 83 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 WDR31Q8NA23 367 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 FGFBP3Q8TAT2 258 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 SRSF12Q8WXF0 261 aaKnown RBP13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 H3BTX0 84 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 LILRA1O75019 489 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 CDKN1AP38936 164 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 AMMECR1LQ6DCA0 310 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 RNF7Q9UBF6 113 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 ANAPC1Q9H1A4 1944 aa13.41□□□□□ -0.26
CLSTN1-201ENST00000361311 ORM1P02763 201 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 GPR183P32249 361 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 GAGE1Q13065 139 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 MEGF9Q9H1U4 602 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 RBFOX2O43251 390 aaKnown RBP eCLIP13.4□□□□□ -0.264e-6■■□□□ 12.8
CLSTN1-201ENST00000361311 CA1P00915 261 aaPredicted RBP13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 TSPOP30536 169 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 PAX9P55771 341 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 EFNB3Q15768 340 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 NUDT11Q96G61 164 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 TNFRSF19Q9NS68 423 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 HIGD1AQ9Y241 93 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 TNFSF15O95150 251 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 TYMSP04818 313 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 S100A4P26447 101 aaKnown RBP13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 CLDN18P56856 261 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 ZIC4Q8N9L1 334 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 LINC00470Q9BZP3 86 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 CLEC5AQ9NY25 188 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 PPIAL4AQ9Y536 164 aa13.4□□□□□ -0.26
CLSTN1-201ENST00000361311 PEX7O00628 323 aa13.4□□□□□ -0.27
CLSTN1-201ENST00000361311 RIPPLY3P57055 190 aa13.4□□□□□ -0.27
CLSTN1-201ENST00000361311 ZNF726P1Q15940 193 aa13.4□□□□□ -0.27
CLSTN1-201ENST00000361311 KLF14Q8TD94 323 aaPredicted RBP13.4□□□□□ -0.27
CLSTN1-201ENST00000361311 SNRNP40Q96DI7 357 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms