RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 HOGA1Q86XE5 327 aa11.2□□□□□ -0.62
GDPD3-201ENST00000360688 GVQW1Q8N7I0 195 aa11.2□□□□□ -0.62
GDPD3-201ENST00000360688 CXorf58Q96LI9 332 aa11.2□□□□□ -0.62
GDPD3-201ENST00000360688 IFT46Q9NQC8 304 aa11.2□□□□□ -0.62
GDPD3-201ENST00000360688 IGHV3-35A0A0C4DH35 117 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 GPR183P32249 361 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 TNFRSF9Q07011 255 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 OR1L6Q8NGR2 347 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 OR4A5Q8NH83 315 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 BET1LQ9NYM9 111 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 MRPL27Q9P0M9 148 aaKnown RBP11.19□□□□□ -0.62
GDPD3-201ENST00000360688 VPS13DQ5THJ4 4388 aa11.19□□□□□ -0.62
GDPD3-201ENST00000360688 IGLC7A0M8Q6 106 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 FAM25AB3EWG3 89 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 FAM25CB3EWG5 89 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 FAM25GB3EWG6 89 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 TNFSF12O43508 249 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 HPGDSO60760 199 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 PRSS3P35030 304 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 ELLP55199 621 aaPredicted RBP11.18□□□□□ -0.62
GDPD3-201ENST00000360688 OR2B8PP59922 312 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 SPCS2Q15005 226 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 Q6ZWC4 215 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 LYG2Q86SG7 212 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 OR2C3Q8N628 320 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 SECTM1Q8WVN6 248 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 CCL28Q9NRJ3 127 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 UFC1Q9Y3C8 167 aa11.18□□□□□ -0.62
GDPD3-201ENST00000360688 SPRY2O43597 315 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 FCER2P06734 321 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 ELK1P19419 428 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 BMI1P35226 326 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 APOC4P55056 127 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 MSMO1Q15800 293 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 DEFB135Q30KP9 77 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 CEMP1Q6PRD7 247 aaPredicted RBP11.17□□□□□ -0.62
GDPD3-201ENST00000360688 PLET1Q6UQ28 207 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 SLC38A6Q8IZM9 456 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 OR5AP2Q8NGF4 316 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
GDPD3-201ENST00000360688 AIFM2Q9BRQ8 373 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 ZNF436Q9C0F3 470 aaPredicted RBP11.17□□□□□ -0.62
GDPD3-201ENST00000360688 C5orf66Q9H5L9 145 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 SCPEP1Q9HB40 452 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 HRASLSQ9HDD0 168 aa11.17□□□□□ -0.62
GDPD3-201ENST00000360688 CCDC59Q9P031 241 aaKnown RBP11.17□□□□□ -0.62
GDPD3-201ENST00000360688 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
GDPD3-201ENST00000360688 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
GDPD3-201ENST00000360688 RBFOX2O43251 390 aaKnown RBP eCLIP11.16□□□□□ -0.62
GDPD3-201ENST00000360688 PTBP1P26599 531 aaKnown RBP eCLIP11.16□□□□□ -0.62
GDPD3-201ENST00000360688 FCGR2CP31995 323 aa11.16□□□□□ -0.62
GDPD3-201ENST00000360688 POU2AF1Q16633 256 aa11.16□□□□□ -0.62
GDPD3-201ENST00000360688 UBQLN2Q9UHD9 624 aa11.16□□□□□ -0.62
GDPD3-201ENST00000360688 ANAPC10Q9UM13 185 aa11.16□□□□□ -0.62
GDPD3-201ENST00000360688 HERC2O95714 4834 aa11.16□□□□□ -0.62
GDPD3-201ENST00000360688 H3BMQ9 156 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 SULT1C2O00338 296 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 UPK2O00526 184 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 TSPAN4O14817 238 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 RGS5O15539 181 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 TAS2R31P59538 309 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 TAS2R46P59540 309 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 ODF3L2Q3SX64 289 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 SNX29P2Q8IUI4 249 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 ZBTB34Q8NCN2 500 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 OR10W1Q8NGF6 305 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 DYNC2LI1Q8TCX1 351 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 TMEM190Q8WZ59 177 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
GDPD3-201ENST00000360688 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 THYN1Q9P016 225 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 EXTL2Q9UBQ6 330 aa11.15□□□□□ -0.62
GDPD3-201ENST00000360688 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 UBE2CO00762 179 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 TGOLN2O43493 480 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 HPRT1P00492 218 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 PPYP01298 95 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 RPA2P15927 270 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 NAT1P18440 290 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 ATF4P18848 351 aaPredicted RBP11.14□□□□□ -0.63
GDPD3-201ENST00000360688 OR5H2Q8NGV7 314 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 RNF183Q96D59 192 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 QTRT1Q9BXR0 403 aaKnown RBP11.14□□□□□ -0.63
GDPD3-201ENST00000360688 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 SLC5A7Q9GZV3 580 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 EHFQ9NZC4 300 aa11.14□□□□□ -0.63
GDPD3-201ENST00000360688 KIR2DL5BA0A0G2JN68 375 aa11.13□□□□□ -0.63
GDPD3-201ENST00000360688 KIR2DL5BA0A0G2JPC4 375 aa11.13□□□□□ -0.63
GDPD3-201ENST00000360688 OR2T8A6NH00 312 aa11.13□□□□□ -0.63
GDPD3-201ENST00000360688 FGF2P09038 288 aa11.13□□□□□ -0.63
GDPD3-201ENST00000360688 NQO2P16083 231 aa11.13□□□□□ -0.63
GDPD3-201ENST00000360688 RCVRNP35243 200 aa11.13□□□□□ -0.63
GDPD3-201ENST00000360688 CATR1Q13166 79 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms