RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RORCP51449 518 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 SPCS2Q15005 226 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 IZUMO4Q1ZYL8 232 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 TBC1D26Q86UD7 250 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 Q8N402 240 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 OR4D10Q8NGI6 311 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 OR52I2Q8NH67 350 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 COMMD5Q9GZQ3 224 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 PLEKHA3Q9HB20 300 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 SCPEP1Q9HB40 452 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 RETNQ9HD89 108 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 NDUFA4L2Q9NRX3 87 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 PEMTQ9UBM1 199 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 MLXQ9UH92 298 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 NBEAL2Q6ZNJ1 2754 aa12.6□□□□□ -0.39
PDLIM7-201ENST00000355572 H3BMQ9 156 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 LGALS9O00182 355 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 PI3P19957 117 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 GPR183P32249 361 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 RCVRNP35243 200 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 HAGHQ16775 308 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 LINC00322Q6ZN03 302 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 CD300LFQ8TDQ1 290 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 EEF1AKMT3Q96AZ1 226 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 SEC22AQ96IW7 307 aa12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 GAR1Q9NY12 217 aaKnown RBP12.59□□□□□ -0.39
PDLIM7-201ENST00000355572 STARD9Q9P2P6 4700 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 FAM25AB3EWG3 89 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 FAM25CB3EWG5 89 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 FAM25GB3EWG6 89 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 CLEC3BP05452 202 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 SERPINE2P07093 398 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 TRAPPC2P0DI81 140 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 TRAPPC2BP0DI82 140 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 DEFA4P12838 97 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 CBLN1P23435 193 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 LHFPL1Q86WI0 220 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 SGPP2Q8IWX5 399 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 MRGPRFQ96AM1 343 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 HINT2Q9BX68 163 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 EXTL2Q9UBQ6 330 aa12.58□□□□□ -0.4
PDLIM7-201ENST00000355572 A8MWP6 167 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 CTDSP2O14595 271 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 CD3DP04234 171 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 HIST1H1BP16401 226 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 TSPAN5P62079 268 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 LAX1Q8IWV1 398 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 TMEM61Q8N0U2 210 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 DEFB125Q8N687 156 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 OR1L8Q8NGR8 309 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 AIFM2Q9BRQ8 373 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 EDA2RQ9HAV5 297 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 OR51B2Q9Y5P1 312 aa12.57□□□□□ -0.4
PDLIM7-201ENST00000355572 CSMD3Q7Z407 3707 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 C15orf61A6NNL5 157 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 K7EIM0 57 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 FGF2P09038 288 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 ADMP35318 185 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 UCP3P55916 312 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 CD81P60033 236 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 ERVK-16P61578 105 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 FAM209BQ5JX69 171 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 FAAP20Q6NZ36 180 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 UXS1Q8NBZ7 420 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 OR2K2Q8NGT1 345 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 NEURL2Q9BR09 285 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 SRSF8Q9BRL6 282 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 CHRDL1Q9BU40 450 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 TMEM14BQ9NUH8 114 aa12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 F11RQ9Y624 299 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-201ENST00000355572 IGHV3OR16-8A0A075B7F1 116 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 TRBV7-1A0A0A6YYK4 115 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 DHFRP00374 187 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 PTBP1P26599 531 aaKnown RBP eCLIP12.55□□□□□ -0.45e-12■■■■■ 40.8
PDLIM7-201ENST00000355572 SPINK9Q5DT21 86 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 CASC10Q5T4H9 136 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 SLC25A24Q6NUK1 477 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 MUC7Q8TAX7 377 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 BORCS5Q969J3 196 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 TP53RKQ96S44 253 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 MTFP1Q9UDX5 166 aa12.55□□□□□ -0.4
PDLIM7-201ENST00000355572 A0A0G2JRQ6 117 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 OR2T8A6NH00 312 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 IGKV1-5P01602 117 aa12.54□□□□□ -0.4
PDLIM7-201ENST00000355572 P0C879 139 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms