RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 MORN3Q6PF18 240 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 SIGLEC12Q96PQ1 595 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 GP6Q9HCN6 339 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 ZFYVE26Q68DK2 2539 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 FCGR3BO75015 233 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 FCN3O75636 299 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 APOHP02749 345 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 SSTR5P35346 364 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 UCP2P55851 309 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 CLLU1OSQ5K130 101 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 ZNF525Q8N782 197 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 RND1Q92730 232 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 COL5A3P25940 1745 aaPredicted RBP4.31□□□□□ -1.72
SKP1-202ENST00000353411 KIAA1549Q9HCM3 1950 aa4.31□□□□□ -1.72
SKP1-202ENST00000353411 MLNRO43193 412 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 PPDPFLQ8WWR9 84 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 Q96M66 194 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 PRNDQ9UKY0 176 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 A0A1W2PS18 150 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 C5orf49A4QMS7 147 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 K7ESM1 405 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 SPINT1O43278 529 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 NGFP01138 241 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 COL9A1P20849 921 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 RBPMS2Q6ZRY4 209 aaKnown RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 SNRNP40Q96DI7 357 aaKnown RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 MALRD1Q5VYJ5 2156 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 SCO2A0A1W2PP80 73 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 ANOS1P23352 680 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 YPEL5P62699 121 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 TSKUQ8WUA8 353 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 GFI1Q99684 422 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 B5MCH6 92 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 CX3CL1P78423 397 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 WIPI1Q5MNZ9 446 aaPredicted RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 BCL6BQ8N143 479 aaPredicted RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 ZNF502Q8TBZ5 544 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 USF3Q68DE3 2245 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 HIGD1CA8MV81 97 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 ACP1P24666 158 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 CYB561P49447 251 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 PGFP49763 221 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 GUSBP1Q15486 140 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 WDR31Q8NA23 367 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 ZNF355PQ9NSJ1 428 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 IL36GQ9NZH8 169 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 AGRNO00468 2067 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 TRAV8-6A0A0B4J262 113 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 A0A1W2PQD3 144 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 TIMM8AO60220 97 aaPredicted RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 C8orf88P0DMB2 117 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 LGALS4P56470 323 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 YPEL3P61236 119 aaPredicted RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 EDDM3AQ14507 147 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 PIGYQ3MUY2 71 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 ZNF585BQ52M93 769 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 LHFPL1Q86WI0 220 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 TMEM190Q8WZ59 177 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 TNRC6AQ8NDV7 1962 aaKnown RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 TRAV8-1A0A0A6YYK1 113 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 SRFP11831 508 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 SPINK9Q5DT21 86 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 WFDC5Q8TCV5 224 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 FBXL7Q9UJT9 491 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 ABCA2Q9BZC7 2435 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 CA6P23280 308 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 MESP2Q0VG99 397 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 WDR82Q6UXN9 313 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 FGFRL1Q8N441 504 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 DUSP15Q9H1R2 295 aaPredicted RBP4.3□□□□□ -1.72
SKP1-202ENST00000353411 PILRBQ9UKJ0 227 aa4.3□□□□□ -1.72
SKP1-202ENST00000353411 A0A1B0GUT8 65 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 ZNF716A6NP11 495 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 TMPRSS2O15393 492 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 CLDN14O95500 239 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 BGLAPP02818 100 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 MEOX1P50221 254 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 FOXA3P55318 350 aaPredicted RBP4.29□□□□□ -1.72
SKP1-202ENST00000353411 SUPT4H1P63272 117 aaKnown RBP4.29□□□□□ -1.72
SKP1-202ENST00000353411 DMRTC1Q5HYR2 192 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 VSTM2LQ96N03 204 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 CEACAM3P40198 252 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 TMEM101Q96IK0 257 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 PLXNB3Q9ULL4 1909 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 TRGV10A0A0A0MS01 117 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 PROB1E7EW31 1015 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 LILRA1O75019 489 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 HBDP02042 147 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 ZNF645Q8N7E2 425 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 NFAM1Q8NET5 270 aaPredicted RBP4.29□□□□□ -1.72
SKP1-202ENST00000353411 ZNF576Q9H609 170 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 FGF21Q9NSA1 209 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 RARRES3Q9UL19 164 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 SIVA1O15304 175 aa4.29□□□□□ -1.72
SKP1-202ENST00000353411 GRPP07492 148 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms