RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 C17orf112F2Z3M2 114 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 GGCTO75223 188 aaKnown RBP16.47■□□□□ 0.23
SPG7-202ENST00000341316 NDUFB7P17568 137 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 THBS3P49746 956 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 ACTL10Q5JWF8 245 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 TREML4Q6UXN2 200 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 RPUSD1Q9UJJ7 312 aaKnown RBP16.47■□□□□ 0.23
SPG7-202ENST00000341316 ZNF835Q9Y2P0 537 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 TRAV38-1A0A0B4J264 116 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 A0A1B0GV90 55 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 C1orf159Q96HA4 380 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 MS4A5Q9H3V2 200 aa16.47■□□□□ 0.23
SPG7-202ENST00000341316 PAX1P15863 534 aa16.46■□□□□ 0.23
SPG7-202ENST00000341316 CHRNA7P36544 502 aa16.46■□□□□ 0.23
SPG7-202ENST00000341316 PRSS8Q16651 343 aa16.46■□□□□ 0.23
SPG7-202ENST00000341316 ACOT6Q3I5F7 207 aaPredicted RBP16.46■□□□□ 0.23
SPG7-202ENST00000341316 ACY3Q96HD9 319 aa16.46■□□□□ 0.23
SPG7-202ENST00000341316 DIRC2Q96SL1 478 aa16.46■□□□□ 0.23
SPG7-202ENST00000341316 TMEM14BQ9NUH8 114 aa16.46■□□□□ 0.23
SPG7-202ENST00000341316 VENTXO95231 258 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 TNFRSF1AP19438 455 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 SRP14P37108 136 aaKnown RBP16.45■□□□□ 0.22
SPG7-202ENST00000341316 RPP30P78346 268 aaKnown RBP16.45■□□□□ 0.22
SPG7-202ENST00000341316 SLC25A48Q6ZT89 311 aaKnown RBP16.45■□□□□ 0.22
SPG7-202ENST00000341316 MGST2Q99735 147 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 IGKV1-16P04430 117 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 CT45A6P0DMU7 189 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 CT45A5P0DMU8 189 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 CT45A7P0DMV0 189 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 PDLIM4P50479 330 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 TMPRSS3P57727 454 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 UBE2G2P60604 165 aa16.45■□□□□ 0.22
SPG7-202ENST00000341316 AURKAIP1Q9NWT8 199 aaPredicted RBP16.45■□□□□ 0.22
SPG7-202ENST00000341316 FOXA2Q9Y261 457 aaPredicted RBP16.45■□□□□ 0.22
SPG7-202ENST00000341316 TRGV8A0A0C4DH27 118 aa16.44■□□□□ 0.22
SPG7-202ENST00000341316 PATZ1Q9HBE1 687 aaKnown RBP16.44■□□□□ 0.22
SPG7-202ENST00000341316 TYMSP04818 313 aa16.44■□□□□ 0.22
SPG7-202ENST00000341316 ATP5G3P48201 142 aa16.44■□□□□ 0.22
SPG7-202ENST00000341316 GNB1P62873 340 aa16.44■□□□□ 0.22
SPG7-202ENST00000341316 WFIKKN1Q96NZ8 548 aa16.44■□□□□ 0.22
SPG7-202ENST00000341316 SCNM1Q9BWG6 230 aa16.44■□□□□ 0.22
SPG7-202ENST00000341316 SLC25A10Q9UBX3 287 aaPredicted RBP16.44■□□□□ 0.22
SPG7-202ENST00000341316 IGF2RP11717 2491 aa16.44■□□□□ 0.22
SPG7-202ENST00000341316 YLPM1P49750 1951 aaKnown RBP16.43■□□□□ 0.22
SPG7-202ENST00000341316 hADV38S2A0JD32 116 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 SRRM4A7MD48 611 aaKnown RBP16.43■□□□□ 0.22
SPG7-202ENST00000341316 CCL3L1P16619 93 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 HSPE1P61604 102 aaKnown RBP16.43■□□□□ 0.22
SPG7-202ENST00000341316 FAM78BQ5VT40 261 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 LINC01551Q86U37 167 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 ZNF664Q8N3J9 261 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 ADTRPQ96IZ2 230 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 LINC00312Q9Y6C7 94 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 SPTA1P02549 2419 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 ZNF705GA8MUZ8 300 aaPredicted RBP16.43■□□□□ 0.22
SPG7-202ENST00000341316 COL8A2P25067 703 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 ARSJQ5FYB0 599 aaPredicted RBP16.43■□□□□ 0.22
SPG7-202ENST00000341316 CST9LP1Q5W188 147 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 MIC13Q5XKP0 118 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 KCNIP4Q6PIL6 250 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 DERL1Q9BUN8 251 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 GGTLC1Q9BX51 225 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 SAP30LQ9HAJ7 183 aa16.43■□□□□ 0.22
SPG7-202ENST00000341316 ZZEF1O43149 2961 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 RNF224P0DH78 156 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 RPL31P62899 125 aaKnown RBP16.42■□□□□ 0.22
SPG7-202ENST00000341316 POU2AF1Q16633 256 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 RND1Q92730 232 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 NEUROG1Q92886 237 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 POLEQ07864 2286 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 NKX6-3A6NJ46 265 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 TMEM178BH3BS89 294 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 IL6RP08887 468 aaPredicted RBP16.42■□□□□ 0.22
SPG7-202ENST00000341316 IL3RAP26951 378 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 OPRK1P41145 380 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 CCL17Q92583 94 aa16.42■□□□□ 0.22
SPG7-202ENST00000341316 LSM4Q9Y4Z0 139 aaKnown RBP16.42■□□□□ 0.22
SPG7-202ENST00000341316 K7ENP7 123 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 PDE6DO43924 150 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 MPDU1O75352 247 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 NDUFB4O95168 129 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 CA2P00918 260 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 GCGP01275 180 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 LYPD2Q6UXB3 125 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 SLC24A4Q8NFF2 622 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 HINT2Q9BX68 163 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 OR51B2Q9Y5P1 312 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 PXMP4Q9Y6I8 212 aa16.41■□□□□ 0.22
SPG7-202ENST00000341316 A8MWP6 167 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 NPY1RP25929 384 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 TMEM200BQ69YZ2 307 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 SLC35D1Q9NTN3 355 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 PGPEP1LA6NFU8 196 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 FAM87AP0C7U9 286 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 C1QTNF9P0C862 333 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 ZNF114Q8NC26 417 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 SSMEM1Q8WWF3 244 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 TMEM18Q96B42 140 aa16.4■□□□□ 0.22
SPG7-202ENST00000341316 PPIAL4EA0A075B759 164 aa16.39■□□□□ 0.21
SPG7-202ENST00000341316 A0A1W2PPV4 95 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms