RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 AREGP15514 252 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 MECP2P51608 486 aaKnown RBP14.82□□□□□ -0.04
SYNE4-202ENST00000340477 SLURP1P55000 103 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 TRIQKQ629K1 86 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 OR5B3Q8NH48 314 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 LSM10Q969L4 123 aaKnown RBP14.82□□□□□ -0.04
SYNE4-202ENST00000340477 TRIM63Q969Q1 353 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 SEC22AQ96IW7 307 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 TMEM56Q96MV1 263 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 TP53RKQ96S44 253 aa14.82□□□□□ -0.04
SYNE4-202ENST00000340477 PEF1Q9UBV8 284 aaKnown RBP14.82□□□□□ -0.04
SYNE4-202ENST00000340477 TRBV9A0A0B4J1U6 114 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 TEX50A0A1B0GTY4 177 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 C15orf61A6NNL5 157 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 E7EUB6 86 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 OR2J3O76001 311 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 REG1AP05451 166 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 CRYGCP07315 174 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 CTRB1P17538 263 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 ZNF45Q02386 682 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 ZNF79Q15937 498 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 C15orf32Q32M92 178 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 PDLIM3Q53GG5 364 aaPredicted RBP14.81□□□□□ -0.04
SYNE4-202ENST00000340477 ZNF57Q68EA5 555 aaPredicted RBP14.81□□□□□ -0.04
SYNE4-202ENST00000340477 CTRB2Q6GPI1 263 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 ZNF343Q6P1L6 599 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 DCUN1D4Q92564 292 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 RRNAD1Q96FB5 475 aaKnown RBP14.81□□□□□ -0.04
SYNE4-202ENST00000340477 NAA60Q9H7X0 242 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 THYN1Q9P016 225 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 FBXL7Q9UJT9 491 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 NSG2Q9Y328 171 aa14.81□□□□□ -0.04
SYNE4-202ENST00000340477 A0A1B0GW64 132 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 IGLC7A0M8Q6 106 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 HOXD3P31249 432 aaPredicted RBP14.8□□□□□ -0.04
SYNE4-202ENST00000340477 INSL3P51460 131 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 DHODHQ02127 395 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 KLF9Q13886 244 aaPredicted RBP14.8□□□□□ -0.04
SYNE4-202ENST00000340477 SGPP2Q8IWX5 399 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 GDPD1Q8N9F7 314 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 PDCD10Q9BUL8 212 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 ELOVL1Q9BW60 279 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 C5orf66Q9H5L9 145 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 TMEM14BQ9NUH8 114 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 GPR132Q9UNW8 380 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 KCNIP3Q9Y2W7 256 aa14.8□□□□□ -0.04
SYNE4-202ENST00000340477 IGKV1-39P01597 117 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 IGKV1D-39P04432 117 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 OR13C7P0DN81 318 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 UCP1P25874 307 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 TATDN3Q17R31 274 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 RPEL1Q2QD12 228 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 SP6Q3SY56 376 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 DLX4Q92988 240 aaPredicted RBP14.79□□□□□ -0.04
SYNE4-202ENST00000340477 EEF1AKMT3Q96AZ1 226 aa14.79□□□□□ -0.04
SYNE4-202ENST00000340477 RTBDNQ9BSG5 229 aaPredicted RBP14.79□□□□□ -0.04
SYNE4-202ENST00000340477 CGB1A6NKQ9 187 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 SAP30O75446 220 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 PRB2P02812 416 aaPredicted RBP14.78□□□□□ -0.04
SYNE4-202ENST00000340477 OR5AC1P0C628 307 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 EGFEM1PQ0D2K5 195 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 ZNF429Q86V71 674 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 OR10W1Q8NGF6 305 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 SRRQ9GZT4 340 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 TMEM222Q9H0R3 208 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 NDUFA4L2Q9NRX3 87 aa14.78□□□□□ -0.04
SYNE4-202ENST00000340477 AURKAIP1Q9NWT8 199 aaPredicted RBP14.78□□□□□ -0.04
SYNE4-202ENST00000340477 CRYM-AS1A6NIL9 109 aa14.77□□□□□ -0.05
SYNE4-202ENST00000340477 WIPF1O43516 503 aa14.77□□□□□ -0.05
SYNE4-202ENST00000340477 ANXA3P12429 323 aa14.77□□□□□ -0.05
SYNE4-202ENST00000340477 C19orf35Q6ZS72 473 aa14.77□□□□□ -0.05
SYNE4-202ENST00000340477 OR1L6Q8NGR2 347 aa14.77□□□□□ -0.05
SYNE4-202ENST00000340477 CXorf58Q96LI9 332 aa14.77□□□□□ -0.05
SYNE4-202ENST00000340477 OR4C12Q96R67 309 aa14.77□□□□□ -0.05
SYNE4-202ENST00000340477 IGLV11-55A0A075B6I3 123 aa14.76□□□□□ -0.05
SYNE4-202ENST00000340477 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.76□□□□□ -0.05
SYNE4-202ENST00000340477 PIGBOS1A0A0B4J2F0 54 aa14.76□□□□□ -0.05
SYNE4-202ENST00000340477 AKR1C4P17516 323 aa14.76□□□□□ -0.05
SYNE4-202ENST00000340477 FAM219AQ8IW50 185 aa14.76□□□□□ -0.05
SYNE4-202ENST00000340477 SLC35G3Q8N808 338 aa14.76□□□□□ -0.05
SYNE4-202ENST00000340477 MRAPQ8TCY5 172 aa14.76□□□□□ -0.05
SYNE4-202ENST00000340477 RBPMSQ93062 196 aaKnown RBP14.76□□□□□ -0.05
SYNE4-202ENST00000340477 SLC25A21Q9BQT8 299 aaPredicted RBP14.76□□□□□ -0.05
SYNE4-202ENST00000340477 PLEKHA3Q9HB20 300 aa14.76□□□□□ -0.05
SYNE4-202ENST00000340477 TRBV7-1A0A0A6YYK4 115 aa14.75□□□□□ -0.05
SYNE4-202ENST00000340477 CDS2O95674 445 aa14.75□□□□□ -0.05
SYNE4-202ENST00000340477 IGKV1-5P01602 117 aa14.75□□□□□ -0.05
SYNE4-202ENST00000340477 HSPE1P61604 102 aaKnown RBP14.75□□□□□ -0.05
SYNE4-202ENST00000340477 PRCDQ00LT1 54 aa14.75□□□□□ -0.05
SYNE4-202ENST00000340477 WT1-ASQ06250 92 aa14.75□□□□□ -0.05
SYNE4-202ENST00000340477 SLC25A24Q6NUK1 477 aa14.75□□□□□ -0.05
SYNE4-202ENST00000340477 FANCD2OSQ96PS1 177 aa14.75□□□□□ -0.05
SYNE4-202ENST00000340477 F11RQ9Y624 299 aaKnown RBP14.75□□□□□ -0.05
SYNE4-202ENST00000340477 NAP1L6A6NFF2 107 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 CENPXA8MT69 81 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 NDUFB8O95169 186 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 IFNA17P01571 189 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 TRBV12-3P01733 135 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 SRPXP78539 464 aa14.74□□□□□ -0.05
SYNE4-202ENST00000340477 ERHP84090 104 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms