RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 OR51B2Q9Y5P1 312 aa12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 ANKRD11Q6UB99 2663 aaPredicted RBP12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 CHRNA7P36544 502 aa12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 ZCCHC14Q8WYQ9 949 aaKnown RBP12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 CORO2AQ92828 525 aa12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 PFDN5Q99471 154 aa12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 HIST1H2BLQ99880 126 aa12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 RALYQ9UKM9 306 aaKnown RBP12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 PRNDQ9UKY0 176 aa12.36□□□□□ -0.43
TNFSF13-201ENST00000338784 FASNP49327 2511 aaKnown RBP12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 K7EM74 188 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 TYMSP04818 313 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 TEX36Q5VZQ5 186 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 STPG3Q8N7X2 389 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 NUP37Q8NFH4 326 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 HINT2Q9BX68 163 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 RPUSD1Q9UJJ7 312 aaKnown RBP12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 DMXL2Q8TDJ6 3036 aa12.35□□□□□ -0.43
TNFSF13-201ENST00000338784 MMP23AO75900 390 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 HIST1H1BP16401 226 aaKnown RBP12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 RHOBP62745 196 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 LCN2P80188 198 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 EFNB3Q15768 340 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 DNLZQ5SXM8 178 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 SLC25A48Q6ZT89 311 aaKnown RBP12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 CISD2Q8N5K1 135 aaKnown RBP12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 AURKAIP1Q9NWT8 199 aaPredicted RBP12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 hADV38S2A0JD32 116 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 XKRY2A2RUG3 117 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 TMEM8BA6NDV4 472 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 FNDC10F2Z333 226 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 J3QR06 171 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 CT45A6P0DMU7 189 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 CT45A5P0DMU8 189 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 CT45A7P0DMV0 189 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 MYOD1P15172 320 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 RTL8BQ17RB0 113 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 ACTL10Q5JWF8 245 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 TMEM108Q6UXF1 575 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 OR1P1Q8NH06 330 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 ACY3Q96HD9 319 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 SEPSECSQ9HD40 501 aaKnown RBP12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 ZNF257Q9Y2Q1 563 aa12.34□□□□□ -0.43
TNFSF13-201ENST00000338784 GCHFRP30047 84 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 PRCDQ00LT1 54 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 COA6Q5JTJ3 125 aaKnown RBP12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 NEUROG1Q92886 237 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 BTF3L4Q96K17 158 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 TMEM204Q9BSN7 226 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 SCNM1Q9BWG6 230 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 PLEKHA3Q9HB20 300 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 SLC35D1Q9NTN3 355 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 TP53TG5Q9Y2B4 290 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 SVILO95425 2214 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 BOD1L1Q8NFC6 3051 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 CADP27708 2225 aa12.33□□□□□ -0.44
TNFSF13-201ENST00000338784 UPK2O00526 184 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 KLK10O43240 276 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 MT-CO2P00403 227 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 IGKV1-16P04430 117 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 RD3LP0DJH9 198 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 NDUFB7P17568 137 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 TNFRSF1AP19438 455 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 CCKARP32238 428 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 CCL8P80075 99 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 ZNF114Q8NC26 417 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 SFRP2Q96HF1 295 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 LINC00312Q9Y6C7 94 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 TRBV20OR9-2A0A075B6H5 130 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 TRBV23-1A0A0A0MS06 115 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 SCO2A0A1W2PP80 73 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 PGPEP1LA6NFU8 196 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 NKX6-3A6NJ46 265 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 IGFBP2P18065 325 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 PRR20EP86478 221 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 PRR20CP86479 221 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 PRR20DP86480 221 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 PRR20BP86481 221 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 PRR20AP86496 221 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 FOXL1Q12952 345 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 SPATA31B1PQ5VZV4 182 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 TMEM37Q8WXS4 190 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 SNRNP40Q96DI7 357 aaKnown RBP12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 PRDM13Q9H4Q3 707 aa12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
TNFSF13-201ENST00000338784 LAMA5O15230 3695 aa12.31□□□□□ -0.44
TNFSF13-201ENST00000338784 MDFIC2A0A1B0GVS7 189 aa12.31□□□□□ -0.44
TNFSF13-201ENST00000338784 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
TNFSF13-201ENST00000338784 C21orf62-AS1Q17RA5 79 aa12.31□□□□□ -0.44
TNFSF13-201ENST00000338784 GAL3ST2Q9H3Q3 398 aa12.31□□□□□ -0.44
TNFSF13-201ENST00000338784 FKBP11Q9NYL4 201 aa12.31□□□□□ -0.44
TNFSF13-201ENST00000338784 HCFC1P51610 2035 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms