RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 SMRP1Q8NCR6 262 aa13.38□□□□□ -0.27
SLIT3-201ENST00000332966 SGK494Q96LW2 274 aa13.38□□□□□ -0.27
SLIT3-201ENST00000332966 TMEM238LA0A1B0GVL6 79 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 PRR19A6NJB7 356 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 A6NJY4 79 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 RPL27AP46776 148 aaKnown RBP13.37□□□□□ -0.27
SLIT3-201ENST00000332966 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 KRTCAP3Q53RY4 240 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 NABP1Q96AH0 204 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 ST20Q9HBF5 79 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 STAG3L3P0CL85 134 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 REG1BP48304 166 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 TWIST1Q15672 202 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 MUC15Q8N387 334 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 FSCN3Q9NQT6 498 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 Q6ZS49 121 aa13.37□□□□□ -0.27
SLIT3-201ENST00000332966 PSMB2P49721 201 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 GCSAMLQ5JQS6 135 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 ZNF497Q6ZNH5 498 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 MDC1Q14676 2089 aaKnown RBP13.36□□□□□ -0.27
SLIT3-201ENST00000332966 GPR6P46095 362 aaPredicted RBP13.36□□□□□ -0.27
SLIT3-201ENST00000332966 ERASQ7Z444 233 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 IFI27L2Q9H2X8 130 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 C5orf63A6NC05 138 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 C9JCJ5 164 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 RAMP3O60896 148 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 MC5RP33032 325 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 RPL30P62888 115 aaKnown RBP13.36□□□□□ -0.27
SLIT3-201ENST00000332966 RELQ04864 619 aaPredicted RBP13.36□□□□□ -0.27
SLIT3-201ENST00000332966 RPL39P5Q59GN2 51 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 NPIPB3Q92617 1050 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 SIGLEC12Q96PQ1 595 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 AHCTF1Q8WYP5 2266 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 HIGD1CA8MV81 97 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 IGKV1-5P01602 117 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 TMEM30BQ3MIR4 351 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 UNQ5815/PRO19632Q6UWF5 114 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 TDHQ8IZJ6 230 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 IDI2-AS1Q9NZ38 188 aa13.36□□□□□ -0.27
SLIT3-201ENST00000332966 F11RQ9Y624 299 aaKnown RBP13.36□□□□□ -0.27
SLIT3-201ENST00000332966 IGHV3-21A0A0B4J1V1 117 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 RPL7P18124 248 aaKnown RBP13.35□□□□□ -0.27
SLIT3-201ENST00000332966 PSMG4Q5JS54 123 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
SLIT3-201ENST00000332966 INSIG2Q9Y5U4 225 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 PPIHO43447 177 aaKnown RBP13.35□□□□□ -0.27
SLIT3-201ENST00000332966 BMI1P35226 326 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 ZNF414Q96IQ9 312 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 MAP1LC3AQ9H492 121 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 COX7A1P24310 79 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 FAM214BQ7L5A3 538 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 SPCS1Q9Y6A9 102 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 EFNB3Q15768 340 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 ACP7Q6ZNF0 438 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 RAB1CQ92928 201 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 DEPPQ9NTK1 212 aa13.35□□□□□ -0.27
SLIT3-201ENST00000332966 RBFOX2O43251 390 aaKnown RBP eCLIP13.34□□□□□ -0.27
SLIT3-201ENST00000332966 CD33P20138 364 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 TMEM42Q69YG0 159 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 LY96Q9Y6Y9 160 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 WNT9BO14905 357 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 CEACAM3P40198 252 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 GAGE1Q13065 139 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 DEFB109BQ30KR1 87 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 TCF24Q7RTU0 167 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 SDK2Q58EX2 2172 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 A0A1W2PQM1 296 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 TYMSP04818 313 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 HIST1H1AQ02539 215 aaPredicted RBP13.34□□□□□ -0.27
SLIT3-201ENST00000332966 ZNF714Q96N38 554 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 CCL13Q99616 98 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 IGLV3-19P01714 112 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 APOHP02749 345 aaPredicted RBP13.34□□□□□ -0.27
SLIT3-201ENST00000332966 GPX1P07203 203 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 APELAP0DMC3 54 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 RPS20P60866 119 aaKnown RBP13.34□□□□□ -0.27
SLIT3-201ENST00000332966 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 OR13A1Q8NGR1 328 aa13.34□□□□□ -0.27
SLIT3-201ENST00000332966 SNAI2O43623 268 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 RFPL3SP0C7P2 107 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 ASCL4Q6XD76 172 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 ASCL5Q7RTU5 278 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 LINC00305Q7Z4B0 112 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.33□□□□□ -0.28
SLIT3-201ENST00000332966 CACNG8Q8WXS5 425 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 HIST1H4GQ99525 98 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 NBEAP1P0C6P0 100 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 RBPMS2Q6ZRY4 209 aaKnown RBP13.33□□□□□ -0.28
SLIT3-201ENST00000332966 LEAP2Q969E1 77 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 JKAMPQ9P055 326 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 FAM90A9PA6NNJ1 464 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 ONECUT1Q9UBC0 465 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 A0A1B0GUT8 65 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 WIPF3A6NGB9 483 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
SLIT3-201ENST00000332966 GPR82Q96P67 336 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 606.2 ms