RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SPOCK3Q9BQ16 436 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 TET2Q6N021 2002 aaPredicted RBP16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 LOC105371242A0A075B767 164 aa16.44■□□□□ 0.22
RIPPLY3-201ENST00000329553 CLN5O75503 358 aa16.44■□□□□ 0.22
RIPPLY3-201ENST00000329553 IGLV1-47P01700 117 aa16.44■□□□□ 0.22
RIPPLY3-201ENST00000329553 LCN15Q6UWW0 184 aa16.44■□□□□ 0.22
RIPPLY3-201ENST00000329553 IGFBPL1Q8WX77 278 aa16.44■□□□□ 0.22
RIPPLY3-201ENST00000329553 APOA2P02652 100 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 SPCS3P61009 180 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 ARF6P62330 175 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 SRSF1Q07955 248 aaKnown RBP eCLIP16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 TMEM41BQ5BJD5 291 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 Q8N7P7 452 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 TNFRSF14Q92956 283 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 PINX1Q96BK5 328 aaKnown RBP16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 CIB3Q96Q77 187 aaPredicted RBP16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 CLEC7AQ9BXN2 247 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 ZFP92A6NM28 416 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 IL6RP08887 468 aaPredicted RBP16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 PRRX1P54821 245 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 RAB11AP62491 216 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 TGIF2LXQ8IUE1 241 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 OR52E5Q8NH55 327 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 TAF15Q92804 592 aaKnown RBP eCLIP16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 P2RX4Q99571 388 aa16.43■□□□□ 0.22
RIPPLY3-201ENST00000329553 COX7A1P24310 79 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 PNRC1Q12796 327 aaPredicted RBP16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 KIAA0141Q14154 515 aaPredicted RBP16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 HLA-DRB5Q30154 266 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 C15orf61A6NNL5 157 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 HOXA5P20719 270 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 IL3RAP26951 378 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 SLC38A11Q08AI6 406 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 PMS2P11Q13670 270 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 PDLIM3Q53GG5 364 aaPredicted RBP16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 LHX4Q969G2 390 aa16.42■□□□□ 0.22
RIPPLY3-201ENST00000329553 IGHV4-39P01824 125 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 FGF8P55075 233 aaPredicted RBP16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 OR8G2PQ6IF36 304 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 CENPVQ7Z7K6 275 aaPredicted RBP16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 OSR1Q8TAX0 266 aaPredicted RBP16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TMPRSS5Q9H3S3 457 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 NIT2Q9NQR4 276 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TMEM14BQ9NUH8 114 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TMEM242Q9NWH2 141 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TIMM9Q9Y5J7 89 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 URGCP-MRPS24S4R325 110 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 MYO18BQ8IUG5 2567 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TACC2O95359 2948 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TGIF2-C20orf24A0A0A6YYL0 155 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 PMS2P5A8MQ11 134 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 ZFP36P26651 326 aaKnown RBP16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 RPS16P62249 146 aaKnown RBP16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TMEM177Q53S58 311 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 BEND2Q8NDZ0 799 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 FLYWCH2Q96CP2 140 aaKnown RBP16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 GSN-AS1Q9NRJ2 163 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 VAX2Q9UIW0 290 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 TCF19Q9Y242 345 aa16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 FOXA2Q9Y261 457 aaPredicted RBP16.41■□□□□ 0.22
RIPPLY3-201ENST00000329553 BUB1B-PAK6H3BSN5 160 aa16.4■□□□□ 0.22
RIPPLY3-201ENST00000329553 MYOD1P15172 320 aa16.4■□□□□ 0.22
RIPPLY3-201ENST00000329553 PNKDQ8N490 385 aa16.4■□□□□ 0.22
RIPPLY3-201ENST00000329553 HARBI1Q96MB7 349 aa16.4■□□□□ 0.22
RIPPLY3-201ENST00000329553 PCGF1Q9BSM1 259 aa16.4■□□□□ 0.22
RIPPLY3-201ENST00000329553 BPESC1Q9GZL8 116 aa16.4■□□□□ 0.22
RIPPLY3-201ENST00000329553 UBE2L5PA0A1B0GUS4 154 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 MAP1LC3B2A6NCE7 125 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 UPK2O00526 184 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 FABP1P07148 127 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 SAA1P0DJI8 122 aaPredicted RBP16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 VDAC2P45880 294 aaPredicted RBP16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 ZNF674Q2M3X9 581 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 PDPNQ86YL7 162 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 MAP1LC3BQ9GZQ8 125 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 SDF2L1Q9HCN8 221 aa16.39■□□□□ 0.22
RIPPLY3-201ENST00000329553 RND2P52198 227 aa16.39■□□□□ 0.21
RIPPLY3-201ENST00000329553 HSPE1P61604 102 aaKnown RBP16.39■□□□□ 0.21
RIPPLY3-201ENST00000329553 OR4P4Q8NGL7 312 aa16.39■□□□□ 0.21
RIPPLY3-201ENST00000329553 OR4C13Q8NGP0 309 aa16.39■□□□□ 0.21
RIPPLY3-201ENST00000329553 CCL19Q99731 98 aa16.39■□□□□ 0.21
RIPPLY3-201ENST00000329553 WASHC3Q9Y3C0 194 aa16.39■□□□□ 0.21
RIPPLY3-201ENST00000329553 TNCP24821 2201 aa16.39■□□□□ 0.21
RIPPLY3-201ENST00000329553 M0R1W7 72 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 RPP25LQ8N5L8 163 aaKnown RBP16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 BET1LQ9NYM9 111 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 IGHV3-72A0A0B4J1Y9 119 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 C15orf62A8K5M9 175 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 IGKV1D-33P01593 117 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 IGKV1-33P01594 117 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 CDX1P47902 265 aaPredicted RBP16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 ELLP55199 621 aaPredicted RBP16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 ATP6V1FQ16864 119 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 OR51M1Q9H341 326 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 HEYLQ9NQ87 328 aaPredicted RBP16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 DOK5Q9P104 306 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 PRNDQ9UKY0 176 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 OR51B2Q9Y5P1 312 aa16.38■□□□□ 0.21
RIPPLY3-201ENST00000329553 CYB5BO43169 146 aa16.37■□□□□ 0.21
RIPPLY3-201ENST00000329553 YIF1AO95070 293 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms