RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 APOHP02749 345 aaPredicted RBP13.02□□□□□ -0.33
FNDC1-201ENST00000297267 IGKV1D-8A0A087WSZ0 117 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 ASPHD1Q5U4P2 390 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 DMRTC2Q8IXT2 367 aaPredicted RBP13.02□□□□□ -0.33
FNDC1-201ENST00000297267 TMEM105Q8N8V8 129 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 TXNDC17Q9BRA2 123 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 SLC25A33Q9BSK2 321 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 A0A0U1RRA0 63 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 CD33P20138 364 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 FOXG1P55316 489 aaPredicted RBP13.02□□□□□ -0.33
FNDC1-201ENST00000297267 HSPE1P61604 102 aaKnown RBP13.02□□□□□ -0.33
FNDC1-201ENST00000297267 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 TMEM45BQ96B21 275 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 ZNF319Q9P2F9 582 aa13.02□□□□□ -0.33
FNDC1-201ENST00000297267 TRAV5A0A0B4J249 113 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 PYYP10082 97 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 BTCP35070 178 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 RPS11P62280 158 aaKnown RBP eCLIP13.01□□□□□ -0.33
FNDC1-201ENST00000297267 LINC00469Q8N7U9 141 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 OR10W1Q8NGF6 305 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 C9orf106Q8NAJ2 232 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 DOCK6Q96HP0 2047 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 C1QTNF9P0C862 333 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 SCN4AP35499 1836 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 TMEM136Q6ZRR5 245 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 RCC1LQ96I51 464 aaKnown RBP13.01□□□□□ -0.33
FNDC1-201ENST00000297267 FABP2P12104 132 aa13.01□□□□□ -0.33
FNDC1-201ENST00000297267 NAA38Q9BRA0 125 aaKnown RBP13.01□□□□□ -0.33
FNDC1-201ENST00000297267 IGHV4-39P01824 125 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 IGHMP01871 453 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 DDB2Q92466 427 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 SPSB4Q96A44 273 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 M0QZK8 103 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 RIPPLY3P57055 190 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 CCL20P78556 96 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 IGFL4Q6B9Z1 124 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 SYT8Q8NBV8 401 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 RNF115Q9Y4L5 304 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 LOC285556D6RIA3 1793 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 NPFFO15130 113 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 GFRA3O60609 400 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 VWCEQ96DN2 955 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 TOMM7Q9P0U1 55 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 RP1P56715 2156 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 B4E171 279 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 TSPAN7P41732 249 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 UCP3P55916 312 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 ABHD17AQ96GS6 310 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 CLEC7AQ9BXN2 247 aa13□□□□□ -0.33
FNDC1-201ENST00000297267 ZNF703Q9H7S9 590 aaPredicted RBP13□□□□□ -0.33
FNDC1-201ENST00000297267 STARD6P59095 220 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 FAM169BQ8N8A8 192 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 AHRRA9YTQ3 701 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 UMODP07911 640 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 GFI1Q99684 422 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 RALGAPA1Q6GYQ0 2036 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 MCRIP2Q9BUT9 160 aaKnown RBP12.99□□□□□ -0.33
FNDC1-201ENST00000297267 ALX4Q9H161 411 aaPredicted RBP12.99□□□□□ -0.33
FNDC1-201ENST00000297267 SELLP14151 372 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 PSG7Q13046 419 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 KLRD1Q13241 179 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 TEX45Q8NA69 505 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 RALGAPA2Q2PPJ7 1873 aa12.99□□□□□ -0.33
FNDC1-201ENST00000297267 FOLR2P14207 255 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 ABCA7Q8IZY2 2146 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 SPRR3Q9UBC9 169 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 APOMO95445 188 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 CSRP3P50461 194 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 BMPERQ8N8U9 685 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 FNDC4Q9H6D8 234 aaPredicted RBP12.98□□□□□ -0.33
FNDC1-201ENST00000297267 SAA2-SAA4A0A096LPE2 208 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 SAA2P0DJI9 122 aaPredicted RBP12.98□□□□□ -0.33
FNDC1-201ENST00000297267 SRSF4Q08170 494 aaKnown RBP12.98□□□□□ -0.33
FNDC1-201ENST00000297267 MRAP2Q96G30 205 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 NEUROG3Q9Y4Z2 214 aa12.98□□□□□ -0.33
FNDC1-201ENST00000297267 GSN-AS1Q9NRJ2 163 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 A0A1W2PR77 199 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 TSPAN13O95857 204 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 FOXF2Q12947 444 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 RNASEH2CQ8TDP1 164 aaKnown RBP12.97□□□□□ -0.33
FNDC1-201ENST00000297267 FBXL7Q9UJT9 491 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 RNF222A6NCQ9 220 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 GCGP01275 180 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 HGFACQ04756 655 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 C3orf36Q3SXR2 165 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 DNAJC13O75165 2243 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 PEX7O00628 323 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 SUMO2P61956 95 aaKnown RBP12.97□□□□□ -0.33
FNDC1-201ENST00000297267 NPPCP23582 126 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 LYRM7Q5U5X0 104 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 IGHV2OR16-5A0A0B4J2B6 119 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 CDX1P47902 265 aaPredicted RBP12.97□□□□□ -0.33
FNDC1-201ENST00000297267 RNF126Q9BV68 326 aa12.97□□□□□ -0.33
FNDC1-201ENST00000297267 SVILO95425 2214 aa12.96□□□□□ -0.33
FNDC1-201ENST00000297267 PF4P02776 101 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms