RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 RND2P52198 227 aa11.24□□□□□ -0.61
RBM47-201ENST00000295971 COX19Q49B96 90 aa11.24□□□□□ -0.61
RBM47-201ENST00000295971 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
RBM47-201ENST00000295971 HIF1ANQ9NWT6 349 aa11.24□□□□□ -0.61
RBM47-201ENST00000295971 WDR83OSQ9Y284 106 aa11.24□□□□□ -0.61
RBM47-201ENST00000295971 H3BTX0 84 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 RNF224P0DH78 156 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
RBM47-201ENST00000295971 PAFAH1B2P68402 229 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 ARSJQ5FYB0 599 aaPredicted RBP11.23□□□□□ -0.61
RBM47-201ENST00000295971 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 GNB4Q9HAV0 340 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 RNF115Q9Y4L5 304 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 FAM90A27PA6NNH2 459 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 NCBP2LA6PVI3 153 aaKnown RBP11.23□□□□□ -0.61
RBM47-201ENST00000295971 DKK1O94907 266 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 FOSL1P15407 271 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 COL8A1P27658 744 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 HTR1DP28221 377 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 GLRXP35754 106 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 FAM27E3Q08E93 113 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 MORN2Q502X0 79 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 ASCL3Q9NQ33 180 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.23□□□□□ -0.61
RBM47-201ENST00000295971 SRIP30626 198 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 Q56UQ5 140 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 FAM162BQ5T6X4 162 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
RBM47-201ENST00000295971 TRBV6-6A0A0A6YYG2 114 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 LINC00473A8K010 186 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 P01737 135 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 C1orf185Q5T7R7 199 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 MIR17HGQ75NE6 70 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 DNAJC4Q9NNZ3 241 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 AMBPP02760 352 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 PRRX1P54821 245 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 RNFT1Q5M7Z0 435 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 ZGRF1Q86YA3 2104 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 OR4F17Q8NGA8 305 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 TMEM242Q9NWH2 141 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 AMMECR1Q9Y4X0 333 aaPredicted RBP11.22□□□□□ -0.61
RBM47-201ENST00000295971 NOTCH3Q9UM47 2321 aa11.22□□□□□ -0.61
RBM47-201ENST00000295971 SS18L1O75177 396 aaPredicted RBP11.21□□□□□ -0.61
RBM47-201ENST00000295971 MT-ND6P03923 174 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 HIST1H1EP10412 219 aaKnown RBP11.21□□□□□ -0.61
RBM47-201ENST00000295971 TMEM170AQ8WVE7 144 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 PERPQ96FX8 193 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 MUC22E2RYF6 1773 aaPredicted RBP11.21□□□□□ -0.61
RBM47-201ENST00000295971 OR4A8P0C604 315 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 FOXC1Q12948 553 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 AARDQ4LEZ3 155 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 ZCCHC24Q8N2G6 241 aaKnown RBP11.21□□□□□ -0.61
RBM47-201ENST00000295971 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 COQ2Q96H96 371 aa11.21□□□□□ -0.61
RBM47-201ENST00000295971 PGPA6NDG6 321 aa11.21□□□□□ -0.62
RBM47-201ENST00000295971 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.62
RBM47-201ENST00000295971 FA2HQ7L5A8 372 aa11.21□□□□□ -0.62
RBM47-201ENST00000295971 OCC1Q8TAD7 63 aa11.21□□□□□ -0.62
RBM47-201ENST00000295971 ATG101Q9BSB4 218 aa11.21□□□□□ -0.62
RBM47-201ENST00000295971 CD59P13987 128 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 RNF151Q2KHN1 245 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 SAA2-SAA4A0A096LPE2 208 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 MLNRO43193 412 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 PPIHO43447 177 aaKnown RBP11.2□□□□□ -0.62
RBM47-201ENST00000295971 SAA2P0DJI9 122 aaPredicted RBP11.2□□□□□ -0.62
RBM47-201ENST00000295971 EML6Q6ZMW3 1958 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 DLL1O00548 723 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
RBM47-201ENST00000295971 GNB2P62879 340 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 JOSD1Q15040 202 aaPredicted RBP11.2□□□□□ -0.62
RBM47-201ENST00000295971 TIMM23BQ5SRD1 257 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 PRSS3P2Q8NHM4 247 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 WDR31Q8NA23 367 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
RBM47-201ENST00000295971 LYPD6BQ8NI32 183 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 FAM222BQ8WU58 562 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 ZNF430Q9H8G1 570 aaPredicted RBP11.2□□□□□ -0.62
RBM47-201ENST00000295971 TNFRSF19Q9NS68 423 aa11.2□□□□□ -0.62
RBM47-201ENST00000295971 PRRC2CQ9Y520 2896 aaKnown RBP11.19□□□□□ -0.62
RBM47-201ENST00000295971 TRAV3A0A0B4J244 114 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 HLA-DQA1P01909 254 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
RBM47-201ENST00000295971 STXBP6Q8NFX7 210 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 IL36BQ9NZH7 164 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 IGHV1-18A0A0C4DH31 117 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 YPEL1O60688 119 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 HYPMO75409 117 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 IGHV2-5P01817 119 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 SCGB2A2Q13296 93 aa11.19□□□□□ -0.62
RBM47-201ENST00000295971 PEAR1Q5VY43 1037 aaPredicted RBP11.19□□□□□ -0.62
RBM47-201ENST00000295971 ZNF600Q6ZNG1 722 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms