RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 RNASE6Q93091 150 aaKnown RBP13.96□□□□□ -0.17
PHRF1-201ENST00000264555 TUBA4BQ9H853 241 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 IGKV3-7A0A075B6H7 116 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.96□□□□□ -0.17
PHRF1-201ENST00000264555 GCGP01275 180 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 IGHV1-46P01743 117 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 AMY1AP04745 511 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 LINC00518Q8N0U6 118 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 VN1R17PQ8TDU5 208 aa13.96□□□□□ -0.17
PHRF1-201ENST00000264555 CCL3L1P16619 93 aa13.96□□□□□ -0.18
PHRF1-201ENST00000264555 PSG9Q00887 426 aa13.96□□□□□ -0.18
PHRF1-201ENST00000264555 PSPNO60542 156 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 FOXH1O75593 365 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 MOSP00540 346 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 PRSS1P07477 247 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 CENPWQ5EE01 88 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 RABAC1Q9UI14 185 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 SLC25A15Q9Y619 301 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 GPR179Q6PRD1 2367 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 RPL7P18124 248 aaKnown RBP13.95□□□□□ -0.18
PHRF1-201ENST00000264555 PDLIM4P50479 330 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 ICAM4Q14773 271 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 SDF2L1Q9HCN8 221 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 SAA1P0DJI8 122 aaPredicted RBP13.95□□□□□ -0.18
PHRF1-201ENST00000264555 SSBP3Q9BWW4 388 aaPredicted RBP13.95□□□□□ -0.18
PHRF1-201ENST00000264555 ID1P41134 155 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 TRBV9A0A0B4J1U6 114 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 DIRC3C9JPN6 131 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 CGAP01215 116 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 NMSQ5H8A3 153 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 TMEM78Q5T7P6 136 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 VKORC1Q9BQB6 163 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 GPR61Q9BZJ8 451 aa13.95□□□□□ -0.18
PHRF1-201ENST00000264555 J3KRW8 73 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 LILRA1O75019 489 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 TMEM144Q7Z5S9 345 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 FBXL15Q9H469 300 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 RTTNQ86VV8 2226 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 ATXN7O15265 892 aaPredicted RBP13.94□□□□□ -0.18
PHRF1-201ENST00000264555 GPX4P36969 197 aaPredicted RBP13.94□□□□□ -0.18
PHRF1-201ENST00000264555 LCN2P80188 198 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 TMEM177Q53S58 311 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 SPACA3Q8IXA5 215 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 HSPB9Q9BQS6 159 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 BET1LQ9NYM9 111 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 CA7P43166 264 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 CD55P08174 381 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 ZNF581Q9P0T4 197 aa13.94□□□□□ -0.18
PHRF1-201ENST00000264555 TMEM97Q5BJF2 176 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 A0A1W2PS18 150 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 COX6B1P14854 86 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 Q6P435 159 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 COLCA1Q6ZS62 124 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 TMEM116Q8NCL8 245 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 CACNA1DQ01668 2161 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 DOCK8Q8NF50 2099 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 RAB9AP51151 201 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 CDC42EP3Q9UKI2 254 aa13.93□□□□□ -0.18
PHRF1-201ENST00000264555 MBD3L4A6NDZ8 208 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 MBD3L3A6NE82 208 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 MBD3L5A6NJ08 208 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 M0QZK8 103 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 GGCTO75223 188 aaKnown RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 ZCCHC24Q8N2G6 241 aaKnown RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 MBD3L2Q8NHZ7 208 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 PAM16Q9Y3D7 125 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 IL4P05112 153 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 CD5P06127 495 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 OR9G9P0C7N8 305 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 PF4V1P10720 104 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 ATP5G3P48201 142 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 OR52E5Q8NH55 327 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 C16orf92Q96LL3 132 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 ATP5J2P56134 94 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 SPANXN1Q5VSR9 72 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 SH2D7A6NKC9 451 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 H3BTX0 84 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 LYL1P12980 280 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 G0S2P27469 103 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 TWIST1Q15672 202 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 GTF2H5Q6ZYL4 71 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
PHRF1-201ENST00000264555 TMEM208Q9BTX3 173 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 PLXNB3Q9ULL4 1909 aa13.92□□□□□ -0.18
PHRF1-201ENST00000264555 NBEAP1P0C6P0 100 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 RNFT1Q5M7Z0 435 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 MBD3L1Q8WWY6 194 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 TMEM133Q9H2Q1 129 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 HEATR5AQ86XA9 2040 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 CBY3A6NI87 242 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 PGLYRP4Q96LB8 373 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 PLXND1Q9Y4D7 1925 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 SCO2A0A1W2PP80 73 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 C1orf147Q96MC9 270 aaPredicted RBP13.91□□□□□ -0.18
PHRF1-201ENST00000264555 EP400Q96L91 3159 aa13.91□□□□□ -0.18
PHRF1-201ENST00000264555 RBPMS2Q6ZRY4 209 aaKnown RBP13.91□□□□□ -0.18
PHRF1-201ENST00000264555 CD177Q8N6Q3 437 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms