RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 APELAP0DMC3 54 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 VEGFBP49765 207 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 NUP210LQ5VU65 1888 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 CFHR1Q03591 330 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 MOB1BQ7L9L4 216 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 CNEP1R1Q8N9A8 125 aa13.62□□□□□ -0.23
GPC1-201ENST00000264039 PTPRZ1P23471 2315 aaPredicted RBP13.61□□□□□ -0.23
GPC1-201ENST00000264039 TMEM238C9JI98 176 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 ZNF295-AS1Q8N0V1 137 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 GTSF1LQ9H1H1 148 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 TMEM140Q9NV12 185 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 ADAMTS9Q9P2N4 1935 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.61□□□□□ -0.23
GPC1-201ENST00000264039 FAM181BA6NEQ2 426 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 ORM2P19652 201 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 FOLR3P41439 243 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 PSG9Q00887 426 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 ZNF645Q8N7E2 425 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 Q8NFD4 153 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 PEF1Q9UBV8 284 aaKnown RBP13.61□□□□□ -0.23
GPC1-201ENST00000264039 EP300Q09472 2414 aaPredicted RBP13.61□□□□□ -0.23
GPC1-201ENST00000264039 C12orf77C9JDV5 145 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 OCIAD1Q9NX40 245 aa13.61□□□□□ -0.23
GPC1-201ENST00000264039 CHCHD2Q9Y6H1 151 aaPredicted RBP13.61□□□□□ -0.23
GPC1-201ENST00000264039 MYO15AQ9UKN7 3530 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 K7EN84 100 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 SPINK14Q6IE38 97 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 TREML4Q6UXN2 200 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 FA2HQ7L5A8 372 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 TMEM45BQ96B21 275 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 FLYWCH2Q96CP2 140 aaKnown RBP13.6□□□□□ -0.23
GPC1-201ENST00000264039 TMEM167BQ9NRX6 74 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 WDR83OSQ9Y284 106 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 OBSL1O75147 1896 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 J3QT63 122 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 HIST1H1EP10412 219 aaKnown RBP13.6□□□□□ -0.23
GPC1-201ENST00000264039 CCL7P80098 99 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 SLAQ13239 276 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 PHF7Q9BWX1 381 aaPredicted RBP13.6□□□□□ -0.23
GPC1-201ENST00000264039 LOC105371242A0A075B767 164 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 A0A0G2JMM0 328 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 A0A1W2PPB8 328 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 KIR3DP1A8MWS1 328 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 SMPD2O60906 423 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 EFNB3Q15768 340 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 TMEM144Q7Z5S9 345 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 MRPL52Q86TS9 123 aaKnown RBP13.6□□□□□ -0.23
GPC1-201ENST00000264039 TWSG1Q9GZX9 223 aa13.6□□□□□ -0.23
GPC1-201ENST00000264039 EPHA8P29322 1005 aaPredicted RBP13.59□□□□□ -0.23
GPC1-201ENST00000264039 NTF4P34130 210 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 CYB561P49447 251 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 RPL39P5Q59GN2 51 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 NFAM1Q8NET5 270 aaPredicted RBP13.59□□□□□ -0.23
GPC1-201ENST00000264039 OR2V2Q96R30 315 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 NABP2Q9BQ15 211 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 IGHV3-21A0A0B4J1V1 117 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 A0A1W2PRD5 423 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 A0A1W2PRF3 423 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 A0A1W2PRM7 423 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 HIGD1CA8MV81 97 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 PSG7Q13046 419 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 ZGRF1Q86YA3 2104 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 TRBV9A0A0B4J1U6 114 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 IGHV2-70DA0A0C4DH43 119 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A10PA6NDY2 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A18PA6NE21 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A16PA6NEW6 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A20PA6NIJ5 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A8PA6NJQ4 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A7PA6NKC0 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A22PA8MWA6 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A12PA8MX19 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A5PA8MXJ8 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A23PA8MXZ1 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 MLNRO43193 412 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 OR9G9P0C7N8 305 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A15PP0C7V4 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A13PP0C7W8 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A14PP0C7W9 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 FAM90A24PP0C7X0 464 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 WFDC3Q8IUB2 231 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 SCCPDHQ8NBX0 429 aa13.59□□□□□ -0.23
GPC1-201ENST00000264039 LAMA1P25391 3075 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 STAG3L2P0CL84 134 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 STAG3L3P0CL85 134 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 ARF6P62330 175 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 DHRS13Q6UX07 377 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 GGTLC1Q9BX51 225 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 MT-CO3P00414 261 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 Q0VG73 95 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 OR1N2Q8NGR9 330 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 REPIN1Q9BWE0 567 aaKnown RBP13.58□□□□□ -0.24
GPC1-201ENST00000264039 B4GALT7Q9UBV7 327 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 DYSFO75923 2080 aa13.58□□□□□ -0.24
GPC1-201ENST00000264039 PTGDSP41222 190 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 RTL8BQ17RB0 113 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms