RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 PMS2P5A8MQ11 134 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 ACTL6BO94805 426 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 TGFAP01135 160 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 FAM106CPP0CH98 169 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 CD24P25063 80 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 ATP5IP56385 69 aaPredicted RBP10.41□□□□□ -0.74
VAMP7-201ENST00000262640 RAB11AP62491 216 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 PJVKQ0ZLH3 352 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 PLGLAQ15195 96 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 ATP6V1FQ16864 119 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 Q8N6K4 173 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 SLC24A4Q8NFF2 622 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 IFNA5P01569 189 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 IGHV4-38-2P0DP08 117 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 TMED6Q8WW62 240 aa10.41□□□□□ -0.74
VAMP7-201ENST00000262640 GCN1Q92616 2671 aaKnown RBP10.41□□□□□ -0.74
VAMP7-201ENST00000262640 TMEM11P17152 192 aa10.4□□□□□ -0.74
VAMP7-201ENST00000262640 NPY1RP25929 384 aa10.4□□□□□ -0.74
VAMP7-201ENST00000262640 COMPP49747 757 aaPredicted RBP10.4□□□□□ -0.74
VAMP7-201ENST00000262640 TNXAQ16473 311 aa10.4□□□□□ -0.74
VAMP7-201ENST00000262640 MRPL41Q8IXM3 137 aaKnown RBP10.4□□□□□ -0.74
VAMP7-201ENST00000262640 SLC25A32Q9H2D1 315 aa10.4□□□□□ -0.74
VAMP7-201ENST00000262640 VPS13CQ709C8 3753 aa10.4□□□□□ -0.74
VAMP7-201ENST00000262640 RPL27AP46776 148 aaKnown RBP10.4□□□□□ -0.75
VAMP7-201ENST00000262640 ERHP84090 104 aaKnown RBP10.4□□□□□ -0.75
VAMP7-201ENST00000262640 C10orf55Q5SWW7 151 aa10.4□□□□□ -0.75
VAMP7-201ENST00000262640 BRD3OSQ6XYD6 125 aa10.4□□□□□ -0.75
VAMP7-201ENST00000262640 FOXC2Q99958 501 aa10.4□□□□□ -0.75
VAMP7-201ENST00000262640 RPS10-NUDT3A0A1W2PQS6 291 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 CGB1A6NKQ9 187 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 CA2P00918 260 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 AVPP01185 164 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 SEC11BP0C7V7 166 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 C5orf64Q2M2E5 130 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 SLC25A24Q6NUK1 477 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 ETV3LQ6ZN32 361 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 HSD17B11Q8NBQ5 300 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 OR10W1Q8NGF6 305 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 TMEM147Q9BVK8 224 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 PARD6GQ9BYG4 376 aaPredicted RBP10.39□□□□□ -0.75
VAMP7-201ENST00000262640 CSMD2Q7Z408 3487 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 TET2Q6N021 2002 aaPredicted RBP10.39□□□□□ -0.75
VAMP7-201ENST00000262640 E7EUB6 86 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 FBXO24O75426 580 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 IFNA4P05014 189 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 SNCAP37840 140 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 BPIFB3P59826 476 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 BSXQ3C1V8 233 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 KLF17Q5JT82 389 aaPredicted RBP10.39□□□□□ -0.75
VAMP7-201ENST00000262640 FAM120AOSQ5T036 256 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 TMEM170AQ8WVE7 144 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 MEGF9Q9H1U4 602 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 C1RLQ9NZP8 487 aa10.39□□□□□ -0.75
VAMP7-201ENST00000262640 A0A0U1RQK1 487 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 SPP1P10451 314 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 GNB1P62873 340 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 FBLN7Q53RD9 439 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 C2orf83Q53S99 150 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 CYB5R2Q6BCY4 276 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 WFDC11Q8NEX6 87 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 LRRC20Q8TCA0 184 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 SCGB1C1Q8TD33 95 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 GNPNAT1Q96EK6 184 aaPredicted RBP10.38□□□□□ -0.75
VAMP7-201ENST00000262640 GGACTQ9BVM4 153 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 UQCC1Q9NVA1 299 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 FAM96BQ9Y3D0 163 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 A0A1B0GW64 132 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 NCBP2LA6PVI3 153 aaKnown RBP10.38□□□□□ -0.75
VAMP7-201ENST00000262640 FCN1O00602 326 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 NMBP08949 121 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 VWC2Q2TAL6 325 aa10.38□□□□□ -0.75
VAMP7-201ENST00000262640 PRSS46E5RG02 174 aa10.37□□□□□ -0.75
VAMP7-201ENST00000262640 FBP1P09467 338 aa10.37□□□□□ -0.75
VAMP7-201ENST00000262640 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
VAMP7-201ENST00000262640 ATP6V0CP27449 155 aa10.37□□□□□ -0.75
VAMP7-201ENST00000262640 DLK1P80370 383 aa10.37□□□□□ -0.75
VAMP7-201ENST00000262640 WT1-ASQ06250 92 aa10.37□□□□□ -0.75
VAMP7-201ENST00000262640 LRRC75BQ2VPJ9 315 aa10.37□□□□□ -0.75
VAMP7-201ENST00000262640 HSD17B13Q7Z5P4 300 aaPredicted RBP10.37□□□□□ -0.75
VAMP7-201ENST00000262640 RNF141Q8WVD5 230 aa10.37□□□□□ -0.75
VAMP7-201ENST00000262640 SRSF8Q9BRL6 282 aaKnown RBP10.37□□□□□ -0.75
VAMP7-201ENST00000262640 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 IGLC7A0M8Q6 106 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 OR13C7P0DN81 318 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 SUB1P53999 127 aaKnown RBP eCLIP10.36□□□□□ -0.753e-8■■□□□ 12.4
VAMP7-201ENST00000262640 SSBP2P81877 361 aaPredicted RBP10.36□□□□□ -0.75
VAMP7-201ENST00000262640 PCNPQ8WW12 178 aaKnown RBP10.36□□□□□ -0.75
VAMP7-201ENST00000262640 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
VAMP7-201ENST00000262640 SH3BGRL3Q9H299 93 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.36□□□□□ -0.75
VAMP7-201ENST00000262640 CNIH1O95406 144 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 SULT1A2P50226 295 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 WDR61Q9GZS3 305 aaKnown RBP10.36□□□□□ -0.75
VAMP7-201ENST00000262640 TNCP24821 2201 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 NBPF19A0A087WUL8 3843 aa10.36□□□□□ -0.75
VAMP7-201ENST00000262640 TEX22C9J3V5 150 aa10.35□□□□□ -0.75
VAMP7-201ENST00000262640 FGF16O43320 207 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms