RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MT-CO2P00403 227 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 BRS3P32247 399 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 AMTP48728 403 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 TMEM164Q5U3C3 297 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 RCHY1Q96PM5 261 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 LPAR2Q9HBW0 351 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 TBL2Q9Y4P3 447 aaKnown RBP14.38□□□□□ -0.11
TRAM1-201ENST00000262213 LOC400499M0QZD8 3231 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 OR7C2O60412 319 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 TDGF1P13385 188 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 INO80CQ6PI98 192 aaPredicted RBP14.38□□□□□ -0.11
TRAM1-201ENST00000262213 NHLRC2Q8NBF2 726 aa14.38□□□□□ -0.11
TRAM1-201ENST00000262213 IGKV1D-17A0A075B6S4 117 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 CECR9P0C854 216 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 COMPP49747 757 aaPredicted RBP14.37□□□□□ -0.11
TRAM1-201ENST00000262213 RAB31Q13636 194 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 VWA1Q6PCB0 445 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 ARFGEF3Q5TH69 2177 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 TRGV10A0A0A0MS01 117 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 FAM201AQ5SY85 155 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 IFI27L2Q9H2X8 130 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 ZNF586Q9NXT0 402 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 ASPMQ8IZT6 3477 aa14.37□□□□□ -0.11
TRAM1-201ENST00000262213 CA1P00915 261 aaPredicted RBP14.36□□□□□ -0.11
TRAM1-201ENST00000262213 BTF3P20290 206 aaKnown RBP14.36□□□□□ -0.11
TRAM1-201ENST00000262213 SPRNQ5BIV9 151 aa14.36□□□□□ -0.11
TRAM1-201ENST00000262213 FAM19A2Q8N3H0 131 aa14.36□□□□□ -0.11
TRAM1-201ENST00000262213 OPN3Q9H1Y3 402 aaPredicted RBP14.36□□□□□ -0.11
TRAM1-201ENST00000262213 YLPM1P49750 1951 aaKnown RBP14.36□□□□□ -0.11
TRAM1-201ENST00000262213 GPX1P07203 203 aa14.36□□□□□ -0.11
TRAM1-201ENST00000262213 TMPRSS3P57727 454 aa14.36□□□□□ -0.11
TRAM1-201ENST00000262213 OR4A47Q6IF82 309 aa14.36□□□□□ -0.11
TRAM1-201ENST00000262213 NRN1Q9NPD7 142 aa14.36□□□□□ -0.11
TRAM1-201ENST00000262213 PCNX2A6NKB5 2137 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 TRAV34A0A0B4J273 112 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 ZNF891A8MT65 544 aaPredicted RBP14.35□□□□□ -0.11
TRAM1-201ENST00000262213 ZNF253O75346 499 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 NTF3P20783 257 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 MLANAQ16655 118 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 PEAR1Q5VY43 1037 aaPredicted RBP14.35□□□□□ -0.11
TRAM1-201ENST00000262213 ATOH7Q8N100 152 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 OR52E5Q8NH55 327 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 INTS1Q8N201 2190 aaKnown RBP14.35□□□□□ -0.11
TRAM1-201ENST00000262213 C15orf61A6NNL5 157 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 SRIP30626 198 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 MMDQ15546 238 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 AARDQ4LEZ3 155 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 PRR31Q5SQ13 230 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 WNT10AQ9GZT5 417 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 PLEKHA3Q9HB20 300 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 JPT1Q9UK76 154 aa14.35□□□□□ -0.11
TRAM1-201ENST00000262213 C9JCJ5 164 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 ESDP10768 282 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 GNG10P50151 68 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 LOXL3P58215 753 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 SUMO1P63165 101 aaKnown RBP14.34□□□□□ -0.11
TRAM1-201ENST00000262213 SPATA45Q537H7 98 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 Q6ZT83 130 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 FAM214BQ7L5A3 538 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 FAM90A1Q86YD7 464 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 OR4S2Q8NH73 311 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 C11orf52Q96A22 123 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 NABP2Q9BQ15 211 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 COL27A1Q8IZC6 1860 aaPredicted RBP14.34□□□□□ -0.11
TRAM1-201ENST00000262213 Q0VG73 95 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 TIGITQ495A1 244 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 LYG1Q8N1E2 194 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 ARRDC1-AS1Q9H2J1 176 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 C21orf140B9A014 251 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 C21orf62-AS1Q17RA5 79 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 TRAT1Q6PIZ9 186 aa14.34□□□□□ -0.11
TRAM1-201ENST00000262213 SSBP3Q9BWW4 388 aaPredicted RBP14.34□□□□□ -0.11
TRAM1-201ENST00000262213 ZFHX4Q86UP3 3567 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 TRAV9-1A0A075B6T8 112 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 SAA2-SAA4A0A096LPE2 208 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 FAM90A9PA6NNJ1 464 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 LINC00869P0C866 280 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 SAA2P0DJI9 122 aaPredicted RBP14.33□□□□□ -0.12
TRAM1-201ENST00000262213 DMRTA1Q5VZB9 504 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 VHLLQ6RSH7 139 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 GNB1LQ9BYB4 327 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 CALYQ9NYX4 217 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 HSPE1P61604 102 aaKnown RBP14.33□□□□□ -0.12
TRAM1-201ENST00000262213 TMEM136Q6ZRR5 245 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 SFXN3Q9BWM7 321 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 CHODLQ9H9P2 273 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 IL19Q9UHD0 177 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 OR51B2Q9Y5P1 312 aa14.33□□□□□ -0.12
TRAM1-201ENST00000262213 RP1L1Q8IWN7 2480 aaPredicted RBP14.32□□□□□ -0.12
TRAM1-201ENST00000262213 A0A1W2PS18 150 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 IGKV3-15P01624 115 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 ZNF83P51522 516 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 CT45A1Q5HYN5 189 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 DUX4L9Q6RFH8 374 aaPredicted RBP14.32□□□□□ -0.12
TRAM1-201ENST00000262213 MOGAT3Q86VF5 341 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 Q8N976 141 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 CT45A3Q8NHU0 189 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 STARD4Q96DR4 205 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 ZNRD1Q9P1U0 126 aa14.32□□□□□ -0.12
TRAM1-201ENST00000262213 GGTLC3B5MD39 225 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms