RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 BEND2Q8NDZ0 799 aa13.96□□□□□ -0.17
SGPP1-201ENST00000247225 Q8TCH9 128 aa13.96□□□□□ -0.17
SGPP1-201ENST00000247225 GNB4Q9HAV0 340 aa13.96□□□□□ -0.17
SGPP1-201ENST00000247225 TBL2Q9Y4P3 447 aaKnown RBP13.96□□□□□ -0.17
SGPP1-201ENST00000247225 NPY1RP25929 384 aa13.96□□□□□ -0.18
SGPP1-201ENST00000247225 RAB31Q13636 194 aa13.96□□□□□ -0.18
SGPP1-201ENST00000247225 RPEL1Q2QD12 228 aa13.96□□□□□ -0.18
SGPP1-201ENST00000247225 KLF13Q9Y2Y9 288 aaPredicted RBP13.96□□□□□ -0.18
SGPP1-201ENST00000247225 ADAMTS20P59510 1910 aa13.96□□□□□ -0.18
SGPP1-201ENST00000247225 IGHV3-21A0A0B4J1V1 117 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 TRAV5A0A0B4J249 113 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 PRB3Q04118 309 aaPredicted RBP13.95□□□□□ -0.18
SGPP1-201ENST00000247225 COA6Q5JTJ3 125 aaKnown RBP13.95□□□□□ -0.18
SGPP1-201ENST00000247225 RPP30P78346 268 aaKnown RBP13.95□□□□□ -0.18
SGPP1-201ENST00000247225 TMEM183BQ1AE95 376 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 TEPPQ6URK8 271 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 Q6ZN92 141 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 SNRNP40Q96DI7 357 aaKnown RBP13.95□□□□□ -0.18
SGPP1-201ENST00000247225 TP53TG3Q9ULZ0 132 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 HINT1P49773 126 aaPredicted RBP13.95□□□□□ -0.18
SGPP1-201ENST00000247225 C11orf42Q8N5U0 333 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 ST6GALNAC6Q969X2 333 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 RCHY1Q96PM5 261 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 ZNF586Q9NXT0 402 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 FBXL7Q9UJT9 491 aa13.95□□□□□ -0.18
SGPP1-201ENST00000247225 A0A1W2PNU3 283 aaPredicted RBP13.94□□□□□ -0.18
SGPP1-201ENST00000247225 CD24P25063 80 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 RHOBP62745 196 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 TIGITQ495A1 244 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 LBHQ53QV2 105 aaPredicted RBP13.94□□□□□ -0.18
SGPP1-201ENST00000247225 SLC35E4Q6ICL7 350 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 C11orf53Q8IXP5 236 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 STARD4Q96DR4 205 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 OPN3Q9H1Y3 402 aaPredicted RBP13.94□□□□□ -0.18
SGPP1-201ENST00000247225 CXXC4Q9H2H0 198 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 NPVFQ9HCQ7 196 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 SELENOKQ9Y6D0 94 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 NPIPB11E5RHQ5 1161 aa13.94□□□□□ -0.18
SGPP1-201ENST00000247225 SSBP4Q9BWG4 385 aaPredicted RBP13.94□□□□□ -0.18
SGPP1-201ENST00000247225 GFRA3O60609 400 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 CYC1P08574 325 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 CECR9P0C854 216 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 SPATA45Q537H7 98 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 ZBTB34Q8NCN2 500 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 TACC2O95359 2948 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 STAG3L2P0CL84 134 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 STAG3L3P0CL85 134 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 ZNF718Q3SXZ3 478 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 C1orf229Q6ZS94 237 aaPredicted RBP13.93□□□□□ -0.18
SGPP1-201ENST00000247225 SLC24A4Q8NFF2 622 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 OR10W1Q8NGF6 305 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 TMEM68Q96MH6 324 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 IL36BQ9NZH7 164 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 M0R1B8 84 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 SS18L1O75177 396 aaPredicted RBP13.93□□□□□ -0.18
SGPP1-201ENST00000247225 PDLIM4P50479 330 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 GP6Q9HCN6 339 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 DYSFO75923 2080 aa13.93□□□□□ -0.18
SGPP1-201ENST00000247225 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
SGPP1-201ENST00000247225 SIAH2O43255 324 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 Q56UQ5 140 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 TRAT1Q6PIZ9 186 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 ZCCHC24Q8N2G6 241 aaKnown RBP13.92□□□□□ -0.18
SGPP1-201ENST00000247225 OR9G1Q8NH87 305 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
SGPP1-201ENST00000247225 FOXL1Q12952 345 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 MORN2Q502X0 79 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 BLNKQ8WV28 456 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 TP73-AS1Q9UF72 201 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 DMXL1Q9Y485 3027 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 MT-CO2P00403 227 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 TYMSP04818 313 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 CENPVQ7Z7K6 275 aaPredicted RBP13.92□□□□□ -0.18
SGPP1-201ENST00000247225 Q8N7P7 452 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 NRN1Q9NPD7 142 aa13.92□□□□□ -0.18
SGPP1-201ENST00000247225 NKX2-8O15522 239 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 TMEM144Q7Z5S9 345 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 ZNF355PQ9NSJ1 428 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 KALRNO60229 2985 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 TCTAP57738 103 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 PMCHL1Q16048 86 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 OR4A47Q6IF82 309 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 RNASEKQ6P5S7 137 aaKnown RBP13.91□□□□□ -0.18
SGPP1-201ENST00000247225 OR2V2Q96R30 315 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 NABP2Q9BQ15 211 aa13.91□□□□□ -0.18
SGPP1-201ENST00000247225 MCRIP2Q9BUT9 160 aaKnown RBP13.91□□□□□ -0.18
SGPP1-201ENST00000247225 J3QR06 171 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 OR5G3P0C626 314 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 OPRK1P41145 380 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 MRPS11P82912 194 aaKnown RBP13.9□□□□□ -0.18
SGPP1-201ENST00000247225 FAM168AQ92567 244 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 BORCS7Q96B45 105 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 MIEN1Q9BRT3 115 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 M0QZ24 198 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 RAB4AP20338 218 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 LINC00310P59036 64 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 RANP62826 216 aaKnown RBP13.9□□□□□ -0.18
SGPP1-201ENST00000247225 ACSF3Q4G176 576 aaPredicted RBP13.9□□□□□ -0.18
SGPP1-201ENST00000247225 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
SGPP1-201ENST00000247225 LPAR2Q9HBW0 351 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms