RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CBLN2Q8IUK8 224 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 SSBP3Q9BWW4 388 aaPredicted RBP18.84■□□□□ 0.61
MSX2-201ENST00000239243 VAX2Q9UIW0 290 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 MALRD1Q5VYJ5 2156 aa18.83■□□□□ 0.61
MSX2-201ENST00000239243 RELNP78509 3460 aa18.83■□□□□ 0.61
MSX2-201ENST00000239243 A0A1W2PPR1 153 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 M0R036 132 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 IGLV2-23P01705 113 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 ERHP84090 104 aaKnown RBP18.83■□□□□ 0.6
MSX2-201ENST00000239243 BSXQ3C1V8 233 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 AWAT1Q58HT5 328 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 FAM122CQ6P4D5 195 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 TEPPQ6URK8 271 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 UBTD1Q9HAC8 227 aa18.83■□□□□ 0.6
MSX2-201ENST00000239243 LSM4Q9Y4Z0 139 aaKnown RBP18.83■□□□□ 0.6
MSX2-201ENST00000239243 RHEBQ15382 184 aa18.82■□□□□ 0.6
MSX2-201ENST00000239243 INSIG2Q9Y5U4 225 aa18.82■□□□□ 0.6
MSX2-201ENST00000239243 C22orf46C9J442 243 aa18.82■□□□□ 0.6
MSX2-201ENST00000239243 CDC34P49427 236 aaPredicted RBP18.82■□□□□ 0.6
MSX2-201ENST00000239243 ARSJQ5FYB0 599 aaPredicted RBP18.82■□□□□ 0.6
MSX2-201ENST00000239243 MGST2Q99735 147 aa18.82■□□□□ 0.6
MSX2-201ENST00000239243 GGTLC1Q9BX51 225 aa18.82■□□□□ 0.6
MSX2-201ENST00000239243 SMCO4Q9NRQ5 59 aa18.82■□□□□ 0.6
MSX2-201ENST00000239243 M0R1W7 72 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 GPR6P46095 362 aaPredicted RBP18.81■□□□□ 0.6
MSX2-201ENST00000239243 CYB561D1Q8N8Q1 229 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 RAB24Q969Q5 203 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 RPS10P5Q9NQ39 176 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 A6NNC1 897 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 SEC14L6B5MCN3 397 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 ENSAO43768 121 aaKnown RBP18.81■□□□□ 0.6
MSX2-201ENST00000239243 IGFBP2P18065 325 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 COX7A1P24310 79 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 RPEQ96AT9 228 aa18.81■□□□□ 0.6
MSX2-201ENST00000239243 LOC105371242A0A075B767 164 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 IGHV1-3A0A0C4DH29 117 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 ATF4P18848 351 aaPredicted RBP18.8■□□□□ 0.6
MSX2-201ENST00000239243 TEX45Q8NA69 505 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 OR4P4Q8NGL7 312 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 MANBALQ9NQG1 85 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 PXMP4Q9Y6I8 212 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 C7orf77A4D0Y5 90 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 RNASE2P10153 161 aaKnown RBP18.8■□□□□ 0.6
MSX2-201ENST00000239243 CEBPGP53567 150 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 C17orf50Q8WW18 174 aa18.8■□□□□ 0.6
MSX2-201ENST00000239243 ZNF430Q9H8G1 570 aaPredicted RBP18.8■□□□□ 0.6
MSX2-201ENST00000239243 A0A1W2PPV4 95 aa18.79■□□□□ 0.6
MSX2-201ENST00000239243 SLC25A17O43808 307 aa18.79■□□□□ 0.6
MSX2-201ENST00000239243 SNRNP70P08621 437 aaKnown RBP18.79■□□□□ 0.6
MSX2-201ENST00000239243 CDKN1AP38936 164 aa18.79■□□□□ 0.6
MSX2-201ENST00000239243 AKIRIN2Q53H80 203 aa18.79■□□□□ 0.6
MSX2-201ENST00000239243 MRPL41Q8IXM3 137 aaKnown RBP18.79■□□□□ 0.6
MSX2-201ENST00000239243 PUS1Q9Y606 427 aaKnown RBP eCLIP18.79■□□□□ 0.6
MSX2-201ENST00000239243 SPTBN1Q01082 2364 aaKnown RBP18.79■□□□□ 0.6
MSX2-201ENST00000239243 C19orf84I3L1E1 186 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 NDUFS6O75380 124 aaKnown RBP18.78■□□□□ 0.6
MSX2-201ENST00000239243 PSMB3P49720 205 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 MOB3BQ86TA1 216 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 PNKDQ8N490 385 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 FAM122AQ96E09 287 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 NIPSNAP3BQ9BS92 247 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 EFNA4P52798 201 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 TMEM249Q2WGJ8 235 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 OR10W1Q8NGF6 305 aa18.78■□□□□ 0.6
MSX2-201ENST00000239243 FBP1P09467 338 aa18.77■□□□□ 0.6
MSX2-201ENST00000239243 RPL29P47914 159 aaKnown RBP18.77■□□□□ 0.6
MSX2-201ENST00000239243 SUB1P53999 127 aaKnown RBP eCLIP18.77■□□□□ 0.6
MSX2-201ENST00000239243 DLX1P56177 255 aa18.77■□□□□ 0.6
MSX2-201ENST00000239243 MMD2Q8IY49 270 aa18.77■□□□□ 0.6
MSX2-201ENST00000239243 OR11H6Q8NGC7 330 aa18.77■□□□□ 0.6
MSX2-201ENST00000239243 IGHV3-72A0A0B4J1Y9 119 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 H3BQ15 152 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 GOSR1O95249 250 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 PAX6P26367 422 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 TMEM144Q7Z5S9 345 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 SLC35E3Q7Z769 313 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 CACNG8Q8WXS5 425 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 RNF5Q99942 180 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 C20orf24Q9BUV8 137 aa18.77■□□□□ 0.59
MSX2-201ENST00000239243 TNCP24821 2201 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 LY6LH3BQJ8 138 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 HMGB3O15347 200 aaKnown RBP18.76■□□□□ 0.59
MSX2-201ENST00000239243 YIF1AO95070 293 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 ARF6P62330 175 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 MEF2BQ02080 365 aaPredicted RBP18.76■□□□□ 0.59
MSX2-201ENST00000239243 MIC13Q5XKP0 118 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 C1orf159Q96HA4 380 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 TUBA4BQ9H853 241 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 MAS1LP35410 378 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 CEACAM3P40198 252 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 B2MP61769 119 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 C1orf122Q6ZSJ8 110 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 TVP23CQ96ET8 276 aa18.76■□□□□ 0.59
MSX2-201ENST00000239243 HTR1DP28221 377 aa18.75■□□□□ 0.59
MSX2-201ENST00000239243 GPX4P36969 197 aaPredicted RBP18.75■□□□□ 0.59
MSX2-201ENST00000239243 CD69Q07108 199 aa18.75■□□□□ 0.59
MSX2-201ENST00000239243 KIR3DL3Q8N743 410 aa18.75■□□□□ 0.59
MSX2-201ENST00000239243 ACTL6BO94805 426 aa18.74■□□□□ 0.59
MSX2-201ENST00000239243 PRTN3P24158 256 aa18.74■□□□□ 0.59
MSX2-201ENST00000239243 C15orf54Q8N8G6 183 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms