RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 LCTP09848 1927 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 OR11H12B2RN74 326 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 PTGDSP41222 190 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 SEC11AP67812 179 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 OR11H1Q8NG94 326 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 OR11H2Q8NH07 326 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 RNASEH2CQ8TDP1 164 aaKnown RBP11.67□□□□□ -0.54
HCFC2-201ENST00000229330 AGMATQ9BSE5 352 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 SRXN1Q9BYN0 137 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 SYNGR3O43761 229 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 DGAT2L7PQ6IED9 249 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 ZNF788Q6ZQV5 615 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 OR4X2Q8NGF9 303 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 FAM131CQ96AQ9 280 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 PRELID3AQ96N28 172 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 SPAARA0A1B0GVQ0 90 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 TMEM160Q9NX00 188 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 TRAV30A0A087WSZ9 112 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 CELA2AP08217 269 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 TIMP3P35625 211 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
HCFC2-201ENST00000229330 RALGAPA2Q2PPJ7 1873 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 ZNF418Q8TF45 676 aaPredicted RBP11.66□□□□□ -0.54
HCFC2-201ENST00000229330 NPIPB3Q92617 1050 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 CD55P08174 381 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 WDR31Q8NA23 367 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 PSME4Q14997 1843 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 MBNL2Q5VZF2 373 aaKnown RBP11.66□□□□□ -0.54
HCFC2-201ENST00000229330 FGF11Q92914 225 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 C18orf15Q96N68 181 aa11.66□□□□□ -0.54
HCFC2-201ENST00000229330 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 M0QZ24 198 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 AREGP15514 252 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.54
HCFC2-201ENST00000229330 LGALS7P47929 136 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 LINC00305Q7Z4B0 112 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 VCX2Q9H322 139 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.54
HCFC2-201ENST00000229330 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.54
HCFC2-201ENST00000229330 SMAGPQ0VAQ4 97 aa11.65□□□□□ -0.54
HCFC2-201ENST00000229330 POLR3KQ9Y2Y1 108 aaPredicted RBP11.65□□□□□ -0.54
HCFC2-201ENST00000229330 C12orf77C9JDV5 145 aa11.65□□□□□ -0.55
HCFC2-201ENST00000229330 MC5RP33032 325 aa11.65□□□□□ -0.55
HCFC2-201ENST00000229330 STPG1Q5TH74 334 aa11.65□□□□□ -0.55
HCFC2-201ENST00000229330 LYZL4Q96KX0 146 aa11.65□□□□□ -0.55
HCFC2-201ENST00000229330 ANOS1P23352 680 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
HCFC2-201ENST00000229330 ASCL5Q7RTU5 278 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 DNASE2BQ8WZ79 361 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 TIMM23BQ5SRD1 257 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 LOXL4Q96JB6 756 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 DIRC2Q96SL1 478 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 CCL13Q99616 98 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 ZNF319Q9P2F9 582 aa11.64□□□□□ -0.55
HCFC2-201ENST00000229330 TPTE2P1Q5T6R2 138 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 IDI2-AS1Q9NZ38 188 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 IGHV1-45A0A0A0MS14 117 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 TYMSP04818 313 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 NBEAP1P0C6P0 100 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 FAM90A2PQ658T7 463 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 SAP25Q8TEE9 199 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 PATJQ8NI35 1801 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 NPSP0C0P6 89 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 PILRBQ9UKJ0 227 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 A0A1B0GW15 77 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 LGALS3P17931 250 aaKnown RBP11.63□□□□□ -0.55
HCFC2-201ENST00000229330 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 PLPPR1Q8TBJ4 325 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 LEAP2Q969E1 77 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 TTTY12Q9BZ98 90 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 IGHV1-69-2A0A0G2JMI3 117 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 FAM181BA6NEQ2 426 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 CD33P20138 364 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 PRDM6Q9NQX0 595 aa11.63□□□□□ -0.55
HCFC2-201ENST00000229330 A0A1W2PR77 199 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 TSPOP30536 169 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 RPL39P5Q59GN2 51 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 CHCHD1Q96BP2 118 aaKnown RBP11.62□□□□□ -0.55
HCFC2-201ENST00000229330 AHCTF1Q8WYP5 2266 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 FCGR2BP31994 310 aaPredicted RBP11.62□□□□□ -0.55
HCFC2-201ENST00000229330 TMEM171Q8WVE6 324 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 FMC1Q96HJ9 113 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 MESP1Q9BRJ9 268 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 ZNF71Q9NQZ8 489 aaPredicted RBP11.62□□□□□ -0.55
HCFC2-201ENST00000229330 LTBRP36941 435 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 PSG9Q00887 426 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 SPSB3Q6PJ21 355 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 RPP25LQ8N5L8 163 aaKnown RBP11.62□□□□□ -0.55
HCFC2-201ENST00000229330 VWCEQ96DN2 955 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 C3orf79P0CE67 100 aa11.62□□□□□ -0.55
HCFC2-201ENST00000229330 KLK15Q9H2R5 256 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms