RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 VENTXO95231 258 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 SLC25A16P16260 332 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 NPY1RP25929 384 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 CLEC12BQ2HXU8 276 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 TMEM182Q6ZP80 229 aaPredicted RBP14.59□□□□□ -0.07
VIM-201ENST00000224237 CFHR4Q92496 578 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 PSMG3-AS1Q96PY0 264 aa14.59□□□□□ -0.07
VIM-201ENST00000224237 GCN1Q92616 2671 aaKnown RBP14.58□□□□□ -0.08
VIM-201ENST00000224237 APCP25054 2843 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 TRIM77I1YAP6 450 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 RRHO14718 337 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 PAX8Q06710 450 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 SSX2Q16385 188 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 VWC2Q2TAL6 325 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 PXDC1Q5TGL8 231 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 IL34Q6ZMJ4 242 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 ETV3LQ6ZN32 361 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 MMD2Q8IY49 270 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 PARP11Q9NR21 331 aa14.58□□□□□ -0.08
VIM-201ENST00000224237 TNCP24821 2201 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 NAV2Q8IVL1 2488 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 A0A1W2PN81 502 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 INS-IGF2F8WCM5 200 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 PRH1P02810 166 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 CRYGBP07316 175 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 CHRNA7P36544 502 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 ATP5IP56385 69 aaPredicted RBP14.57□□□□□ -0.08
VIM-201ENST00000224237 PSG5Q15238 335 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 Q6ZRG5 221 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 PSMG3Q9BT73 122 aaPredicted RBP14.57□□□□□ -0.08
VIM-201ENST00000224237 GGACTQ9BVM4 153 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 TPSG1Q9NRR2 321 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 IFNA4P05014 189 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 CNTFRP26992 372 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 BPIFCQ8NFQ6 507 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 TMEM170AQ8WVE7 144 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 TAF15Q92804 592 aaKnown RBP eCLIP14.57□□□□□ -0.08
VIM-201ENST00000224237 SIGLEC9Q9Y336 463 aa14.57□□□□□ -0.08
VIM-201ENST00000224237 PRSS46E5RG02 174 aa14.56□□□□□ -0.08
VIM-201ENST00000224237 PAX6P26367 422 aa14.56□□□□□ -0.08
VIM-201ENST00000224237 MAS1LP35410 378 aa14.56□□□□□ -0.08
VIM-201ENST00000224237 CAMLGP49069 296 aa14.56□□□□□ -0.08
VIM-201ENST00000224237 PRSS8Q16651 343 aa14.56□□□□□ -0.08
VIM-201ENST00000224237 RSG1Q9BU20 258 aa14.56□□□□□ -0.08
VIM-201ENST00000224237 BEX4Q9NWD9 120 aaPredicted RBP14.56□□□□□ -0.08
VIM-201ENST00000224237 METTL1Q9UBP6 276 aaKnown RBP14.56□□□□□ -0.08
VIM-201ENST00000224237 MOSP00540 346 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 CA2P00918 260 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 IGKV1D-33P01593 117 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 IGKV1-33P01594 117 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 ERHP84090 104 aaKnown RBP14.55□□□□□ -0.08
VIM-201ENST00000224237 PJVKQ0ZLH3 352 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 MRGPRG-AS1Q2M3A8 158 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 AKR1C8PQ5T2L2 129 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 PPP1R27Q86WC6 154 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 MALSU1Q96EH3 234 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 RFNGQ9Y644 331 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 TMEM218A2RU14 115 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 ACTL6BO94805 426 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 APOC3P02656 99 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 DLK1P80370 383 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 SERF2P84101 59 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 BSXQ3C1V8 233 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 C2orf83Q53S99 150 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 TMA7Q9Y2S6 64 aaKnown RBP14.55□□□□□ -0.08
VIM-201ENST00000224237 TIMM9Q9Y5J7 89 aa14.55□□□□□ -0.08
VIM-201ENST00000224237 E7EUB6 86 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 MSMBP08118 114 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 SNCAP37840 140 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 ZNF616Q08AN1 781 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 MMDQ15546 238 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 DYNAPQ8N1N2 210 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 OR10W1Q8NGF6 305 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 LYPD6BQ8NI32 183 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 HRH4Q9H3N8 390 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 FBXO7Q9Y3I1 522 aa14.54□□□□□ -0.08
VIM-201ENST00000224237 CGB1A6NKQ9 187 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 FGF7P21781 194 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 SAA4P35542 130 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 FHITP49789 147 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 TNXAQ16473 311 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 C10orf55Q5SWW7 151 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 BTNL8Q6UX41 500 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 DPPA3Q6W0C5 159 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 MRPL41Q8IXM3 137 aaKnown RBP14.53□□□□□ -0.08
VIM-201ENST00000224237 LRRC75A-AS1Q8N1F1 130 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 OR2T10Q8NGZ9 312 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 C17orf50Q8WW18 174 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 FBXL15Q9H469 300 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 KIAA1456Q9P272 454 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 CSMD1Q96PZ7 3565 aa14.53□□□□□ -0.08
VIM-201ENST00000224237 CENPVL3A0A0U1RRI6 287 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 B4DSR2 109 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 NBR2O15453 112 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 SNRNP70P08621 437 aaKnown RBP14.52□□□□□ -0.08
VIM-201ENST00000224237 MDKP21741 143 aaPredicted RBP14.52□□□□□ -0.08
VIM-201ENST00000224237 HES1Q14469 280 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 PLGLAQ15195 96 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 DEFB113Q30KQ7 82 aa14.52□□□□□ -0.08
VIM-201ENST00000224237 CENPVQ7Z7K6 275 aaPredicted RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms