RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 WISP2O76076 250 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 TRAT1Q6PIZ9 186 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 OR2Z1Q8NG97 314 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 GUCD1Q96NT3 240 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 KCNIP2Q9NS61 270 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 WIPI2Q9Y4P8 454 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 TIMM9Q9Y5J7 89 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 KALRNO60229 2985 aa13.9□□□□□ -0.18
CTDP1-201ENST00000075430 KIR2DL5BA0A0G2JN68 375 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 KIR2DL5BA0A0G2JPC4 375 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 SPINT2O43291 252 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 IL6RP08887 468 aaPredicted RBP13.89□□□□□ -0.19
CTDP1-201ENST00000075430 CD46P15529 392 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 FOXA3P55318 350 aaPredicted RBP13.89□□□□□ -0.19
CTDP1-201ENST00000075430 COL5A1-AS1Q5SY13 56 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 KIR2DL5AQ8N109 375 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 GGTLC1Q9BX51 225 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 SH2D2AQ9NP31 389 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 WDR83OSQ9Y284 106 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
CTDP1-201ENST00000075430 DNPH1O43598 174 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 RANP62826 216 aaKnown RBP13.89□□□□□ -0.19
CTDP1-201ENST00000075430 DNLZQ5SXM8 178 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 Q8NFD4 153 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 LRRC29Q8WV35 223 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 ZC2HC1AQ96GY0 325 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 ADGRG4Q8IZF6 3080 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 A0A1W2PN81 502 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 MLNRO43193 412 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 MRPL49Q13405 166 aaKnown RBP13.89□□□□□ -0.19
CTDP1-201ENST00000075430 RNPS1Q15287 305 aaKnown RBP13.89□□□□□ -0.19
CTDP1-201ENST00000075430 TIGITQ495A1 244 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 SLC24A4Q8NFF2 622 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 S1PR3Q99500 378 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 PMCHL2Q9BQD1 86 aa13.89□□□□□ -0.19
CTDP1-201ENST00000075430 HSBP1O75506 76 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 CXorf1O96002 111 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 RPP30P78346 268 aaKnown RBP13.88□□□□□ -0.19
CTDP1-201ENST00000075430 KRTAP27-1Q3LI81 207 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 MOB1BQ7L9L4 216 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 LYG1Q8N1E2 194 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 IL36BQ9NZH7 164 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 IGHV3-21A0A0B4J1V1 117 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 TRAV5A0A0B4J249 113 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 CBY3A6NI87 242 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 SNAI2O43623 268 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 HOXC12P31275 282 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 EFNB3Q15768 340 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 KLF14Q8TD94 323 aaPredicted RBP13.88□□□□□ -0.19
CTDP1-201ENST00000075430 ZNF355PQ9NSJ1 428 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 SLC35D1Q9NTN3 355 aa13.88□□□□□ -0.19
CTDP1-201ENST00000075430 OOEPA6NGQ2 149 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 TYMSP04818 313 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 PAX1P15863 534 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 VAMP3Q15836 100 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 TMEM144Q7Z5S9 345 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 EAF1Q96JC9 268 aaPredicted RBP13.87□□□□□ -0.19
CTDP1-201ENST00000075430 TMEM140Q9NV12 185 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 FAM90A26D6RGX4 464 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 SFTPCP11686 197 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 MFAP2P55001 183 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 FAM168AQ92567 244 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 TAAR6Q96RI8 345 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 ZNF137PP52743 207 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 FOXL1Q12952 345 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 SLC35E1Q96K37 410 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 TCF19Q9Y242 345 aa13.87□□□□□ -0.19
CTDP1-201ENST00000075430 COL5A1P20908 1838 aaPredicted RBP13.87□□□□□ -0.19
CTDP1-201ENST00000075430 RAB29O14966 203 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 C3orf79P0CE67 100 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 USF1P22415 310 aaPredicted RBP13.86□□□□□ -0.19
CTDP1-201ENST00000075430 TRIB1Q96RU8 372 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 CLEC5AQ9NY25 188 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 KMT2EQ8IZD2 1858 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 REG1BP48304 166 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 RNASE8Q8TDE3 154 aaKnown RBP13.86□□□□□ -0.19
CTDP1-201ENST00000075430 NANOS1Q8WY41 292 aaKnown RBP13.86□□□□□ -0.19
CTDP1-201ENST00000075430 ZNF331Q9NQX6 463 aaPredicted RBP13.86□□□□□ -0.19
CTDP1-201ENST00000075430 PIGBOS1A0A0B4J2F0 54 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 SMPD2O60906 423 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 PAFAH1B2P68402 229 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 SRSF6Q13247 344 aaKnown RBP13.86□□□□□ -0.19
CTDP1-201ENST00000075430 BLNKQ8WV28 456 aa13.86□□□□□ -0.19
CTDP1-201ENST00000075430 DPRXA6NFQ7 191 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 KLRC4-KLRK1H3BQV0 150 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 M0QZK8 103 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 CA2P00918 260 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 RPL8P62917 257 aaKnown RBP13.85□□□□□ -0.19
CTDP1-201ENST00000075430 FBXW9Q5XUX1 488 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 OR2D3Q8NGH3 330 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 PKIBQ9C010 78 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 GPX1P07203 203 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 CSN3P07498 182 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 STAG3L2P0CL84 134 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 STAG3L3P0CL85 134 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 NPY1RP25929 384 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 ZNF83P51522 516 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 RHOBP62745 196 aa13.85□□□□□ -0.19
CTDP1-201ENST00000075430 RAB31Q13636 194 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms