RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 C5orf30Q96GV9 206 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 RHOVQ96L33 236 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 GPHA2Q96T91 129 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 GGACTQ9BVM4 153 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 ENY2Q9NPA8 101 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 FBXL17Q9UF56 701 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 POLR3KQ9Y2Y1 108 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-234ENST00000642041 WASHC3Q9Y3C0 194 aa13.95□□□□□ -0.18
PHGDH-234ENST00000642041 STRAPQ9Y3F4 350 aaKnown RBP13.95□□□□□ -0.18
PHGDH-234ENST00000642041 MSGN1A6NI15 193 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 TRIM77I1YAP6 450 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 SLC31A2O15432 143 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 CFDP00746 253 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-234ENST00000642041 CT45A6P0DMU7 189 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 CT45A5P0DMU8 189 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 CT45A7P0DMV0 189 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 BRWD1-AS2P59051 145 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 HLA-DRB5Q30154 266 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 CCDC144NLQ6NUI1 221 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 ALKAL2Q6UX46 152 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 ZNF383Q8NA42 475 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 OR11H6Q8NGC7 330 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 OR5B3Q8NH48 314 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 ZNF418Q8TF45 676 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-234ENST00000642041 ST6GALNAC6Q969X2 333 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 GINS3Q9BRX5 216 aa13.94□□□□□ -0.18
PHGDH-234ENST00000642041 FOXA2Q9Y261 457 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-234ENST00000642041 IGHV2-26A0A0B4J1V2 119 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 A0A0G2JRQ6 117 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 CEBPZOSA8MTT3 80 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 LEUTXA8MZ59 168 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 CRYZL1O95825 349 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 IFNA17P01571 189 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 IGLV1-47P01700 117 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 HSPE1P61604 102 aaKnown RBP13.93□□□□□ -0.18
PHGDH-234ENST00000642041 RAB11AP62491 216 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 VMA21Q3ZAQ7 101 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 DPPA3Q6W0C5 159 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 Q6ZRM9 215 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 C11orf42Q8N5U0 333 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 OR10P1Q8NGE3 313 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 SCGB1C1Q8TD33 95 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 DTD1Q8TEA8 209 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 TMEM140Q9NV12 185 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 NUP50Q9UKX7 468 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 AUP1Q9Y679 476 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 RYR3Q15413 4870 aa13.93□□□□□ -0.18
PHGDH-234ENST00000642041 FAM24AA6NFZ4 105 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 SHOXO15266 292 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 MMP23AO75900 390 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 SCGB2A2Q13296 93 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 MINOS1Q5TGZ0 78 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 EIF4E3Q8N5X7 224 aaKnown RBP13.92□□□□□ -0.18
PHGDH-234ENST00000642041 COMMD1Q8N668 190 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 ATP5SQ99766 215 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 NABP2Q9BQ15 211 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 MAGT1Q9H0U3 335 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 MINOS1-NBL1R4GNA1 71 aa13.92□□□□□ -0.18
PHGDH-234ENST00000642041 RPS10-NUDT3A0A1W2PQS6 291 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 C15orf61A6NNL5 157 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 INS-IGF2F8WCM5 200 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 H0YJW9 148 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 BUB1B-PAK6H3BSN5 160 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 TEX46H3BTG2 121 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 H7C2Y5 167 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 FGF16O43320 207 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 IGHV2-5P01817 119 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 IL6RP08887 468 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-234ENST00000642041 MAS1LP35410 378 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 SULT1A2P50226 295 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 PAX9P55771 341 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 SERF2P84101 59 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 OR2B11Q5JQS5 317 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 TMEM14EPQ6UXP3 125 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 LINC01356Q8N9X3 169 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 TEX45Q8NA69 505 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 OR5C1Q8NGR4 320 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 RPEQ96AT9 228 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 BPESC1Q9GZL8 116 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 RBKSQ9H477 322 aa13.91□□□□□ -0.18
PHGDH-234ENST00000642041 A0A1W2PN81 502 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 UPK2O00526 184 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 FCN3O75636 299 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 KBTBD11O94819 623 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 NMBP08949 121 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 SPP1P10451 314 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 HTR1DP28221 377 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 CHRNA7P36544 502 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 HILS1P60008 231 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 RAB2AP61019 212 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 RELBQ01201 579 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 NHLH2Q02577 135 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 RPL7L1Q6DKI1 246 aaKnown RBP13.9□□□□□ -0.18
PHGDH-234ENST00000642041 SLC25A24Q6NUK1 477 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 UQCC3Q6UW78 93 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 HSD17B13Q7Z5P4 300 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-234ENST00000642041 LEAP2Q969E1 77 aa13.9□□□□□ -0.18
PHGDH-234ENST00000642041 TMEM14BQ9NUH8 114 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms