RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 STRADBQ9C0K7 418 aa11.47□□□□□ -0.57
SCARB2-227ENST00000640957 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-227ENST00000640957 IGHV1-45A0A0A0MS14 117 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 hDV102S1A0JD36 115 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 PMS2P5A8MQ11 134 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 VAMP5O95183 116 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 CRYABP02511 175 aaKnown RBP11.46□□□□□ -0.57
SCARB2-227ENST00000640957 IGLL1P15814 213 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 RPL8P62917 257 aaKnown RBP11.46□□□□□ -0.57
SCARB2-227ENST00000640957 TNXAQ16473 311 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 ALKBH6Q3KRA9 238 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 NIT1Q86X76 327 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 FADS6Q8N9I5 356 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 PCED1AQ9H1Q7 454 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 GAL3ST2Q9H3Q3 398 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 MS4A5Q9H3V2 200 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 PROK2Q9HC23 129 aa11.46□□□□□ -0.57
SCARB2-227ENST00000640957 LINC00473A8K010 186 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 SSTR5P35346 364 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 CYB561P49447 251 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 FOXA3P55318 350 aaPredicted RBP11.46□□□□□ -0.58
SCARB2-227ENST00000640957 BRWD1-AS2P59051 145 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 RAC1P63000 192 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 CEACAM21Q3KPI0 293 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 AMMECR1LQ6DCA0 310 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 PSG11Q9UQ72 335 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 KALRNO60229 2985 aa11.46□□□□□ -0.58
SCARB2-227ENST00000640957 CELA3AP09093 270 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 COX6A1P12074 109 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 LGALS4P56470 323 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 RNPS1Q15287 305 aaKnown RBP11.45□□□□□ -0.58
SCARB2-227ENST00000640957 CENPWQ5EE01 88 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 STUMQ69YW2 141 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 SPATA12Q7Z6I5 190 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 S100A7AQ86SG5 101 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 ZNF891A8MT65 544 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-227ENST00000640957 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 NUDT3O95989 172 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 CA7P43166 264 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 GABRA2P47869 451 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 SLAQ13239 276 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 SSPNQ14714 243 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 TMEM105Q8N8V8 129 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 OR2Y1Q8NGV0 311 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 PLXNB1O43157 2135 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 EXPH5Q8NEV8 1989 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 SAP30O75446 220 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 ZNF324O75467 553 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-227ENST00000640957 HSBP1O75506 76 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 CER1O95813 267 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 IGHV3-48P01763 117 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 EDDM3AQ14507 147 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
SCARB2-227ENST00000640957 GJE1A6NN92 205 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 C15orf62A8K5M9 175 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 BMPR1BO00238 502 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 FCGR3BO75015 233 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 MRPL14Q6P1L8 145 aaKnown RBP11.44□□□□□ -0.58
SCARB2-227ENST00000640957 TUSC5Q8IXB3 177 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 LEAP2Q969E1 77 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 KCNIP2Q9NS61 270 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 SLC35D1Q9NTN3 355 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 FZR1Q9UM11 496 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 PCNX2A6NKB5 2137 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 IGHV2OR16-5A0A0B4J2B6 119 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 LRP5LA4QPB2 252 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 A8MXE2 369 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 M0R2Z0 102 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 PSPNO60542 156 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 NEURL1O76050 574 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 PSG5Q15238 335 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 DEFB123Q8N688 67 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 ARRDC1-AS1Q9H2J1 176 aa11.44□□□□□ -0.58
SCARB2-227ENST00000640957 ZNF716A6NP11 495 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 KLF7O75840 302 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-227ENST00000640957 CELA3BP08861 270 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 RAC2P15153 192 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 CDKN1BP46527 198 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 PPOXP50336 477 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 FOXE3Q13461 319 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 EBLN2Q6P2I7 272 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 MIR17HGQ75NE6 70 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 Q8N7P7 452 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 CPT1CQ8TCG5 803 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-227ENST00000640957 KCNS1Q96KK3 526 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 TNFSF4P23510 183 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 GNG4P50150 75 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 RAC3P60763 192 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 DCAF12Q5T6F0 453 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 ABHD17BQ5VST6 288 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 TREML4Q6UXN2 200 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 Q6ZSR3 168 aa11.43□□□□□ -0.58
SCARB2-227ENST00000640957 BCL2L2Q92843 193 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-227ENST00000640957 MGST2Q99735 147 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms