RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 CNBD2Q96M20 576 aa14.16□□□□□ -0.14
SMN2-215ENST00000628696 CCL28Q9NRJ3 127 aa14.16□□□□□ -0.14
SMN2-215ENST00000628696 BLOC1S6Q9UL45 172 aa14.16□□□□□ -0.14
SMN2-215ENST00000628696 A0A0J9YWU9 116 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 CGB1A6NKQ9 187 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 NOTOA8MTQ0 251 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 ARPC4P59998 168 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 PLET1Q6UQ28 207 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 SPAG16Q8N0X2 631 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 MARC2Q969Z3 335 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 AIFM2Q9BRQ8 373 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 BET1LQ9NYM9 111 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 DAPK2Q9UIK4 370 aa14.15□□□□□ -0.14
SMN2-215ENST00000628696 TRAV25A0A0B4J276 109 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 PTHLHP12272 177 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 FCGR2CP31995 323 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 OR2B8PP59922 312 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 KLK9Q2XQG4 91 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 TIMM50Q3ZCQ8 353 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 SLC38A6Q8IZM9 456 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 OR2C3Q8N628 320 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 OR4A5Q8NH83 315 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 MRPL27Q9P0M9 148 aaKnown RBP14.14□□□□□ -0.15
SMN2-215ENST00000628696 UBQLN2Q9UHD9 624 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 KLK9Q9UKQ9 250 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 UFC1Q9Y3C8 167 aa14.14□□□□□ -0.15
SMN2-215ENST00000628696 SULT1C2O00338 296 aa14.13□□□□□ -0.15
SMN2-215ENST00000628696 SCGNO76038 276 aa14.13□□□□□ -0.15
SMN2-215ENST00000628696 C8orf88P0DMB2 117 aa14.13□□□□□ -0.15
SMN2-215ENST00000628696 GALP22466 123 aa14.13□□□□□ -0.15
SMN2-215ENST00000628696 ZNF502Q8TBZ5 544 aa14.13□□□□□ -0.15
SMN2-215ENST00000628696 LGALS14Q8TCE9 139 aa14.13□□□□□ -0.15
SMN2-215ENST00000628696 COMMD5Q9GZQ3 224 aa14.13□□□□□ -0.15
SMN2-215ENST00000628696 RRP15Q9Y3B9 282 aaKnown RBP14.13□□□□□ -0.15
SMN2-215ENST00000628696 TRAV3A0A0B4J244 114 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 NUPR2A6NF83 97 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 SPRY2O43597 315 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 APOC4P55056 127 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMN2-215ENST00000628696 LYG2Q86SG7 212 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 BEST4Q8NFU0 473 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 OR13F1Q8NGS4 319 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 SLC5A7Q9GZV3 580 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 TXNL4BQ9NX01 149 aaKnown RBP14.12□□□□□ -0.15
SMN2-215ENST00000628696 THYN1Q9P016 225 aa14.12□□□□□ -0.15
SMN2-215ENST00000628696 TRAV18A0A075B6X5 111 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 IGLC7A0M8Q6 106 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 UPK2O00526 184 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 FCER2P06734 321 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 RPA2P15927 270 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 ELLP55199 621 aaPredicted RBP14.11□□□□□ -0.15
SMN2-215ENST00000628696 FXYD4P59646 89 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 DEFB135Q30KP9 77 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 IZUMO2Q6UXV1 221 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 GVQW1Q8N7I0 195 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 VCX3BQ9H321 246 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 C5orf66Q9H5L9 145 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 RHBDL2Q9NX52 303 aa14.11□□□□□ -0.15
SMN2-215ENST00000628696 HPRT1P00492 218 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 PPYP01298 95 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 NQO2P16083 231 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 PTBP1P26599 531 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMN2-215ENST00000628696 PSMB9P28065 219 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 BMI1P35226 326 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 TAS2R31P59538 309 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 TNFRSF9Q07011 255 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 CATR1Q13166 79 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 CEMP1Q6PRD7 247 aaPredicted RBP14.1□□□□□ -0.15
SMN2-215ENST00000628696 Q6ZWC4 215 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 TPRA1Q86W33 373 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 WFDC3Q8IUB2 231 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 ZBTB34Q8NCN2 500 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 DMBX1Q8NFW5 382 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 OR10W1Q8NGF6 305 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 SPAG8Q99932 426 aaPredicted RBP14.1□□□□□ -0.15
SMN2-215ENST00000628696 ZNF436Q9C0F3 470 aaPredicted RBP14.1□□□□□ -0.15
SMN2-215ENST00000628696 TP53TG1Q9Y2A0 90 aa14.1□□□□□ -0.15
SMN2-215ENST00000628696 OR2T8A6NH00 312 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 CYB5BO43169 146 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 RBFOX2O43251 390 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMN2-215ENST00000628696 TGOLN2O43493 480 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 FGF9P31371 208 aaPredicted RBP14.09□□□□□ -0.15
SMN2-215ENST00000628696 HSPA13P48723 471 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 MSMO1Q15800 293 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 LAMTOR1Q6IAA8 161 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 SLC25A24Q6NUK1 477 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 SFXN4Q6P4A7 337 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 OR51H1Q8NH63 302 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
SMN2-215ENST00000628696 TMEM140Q9NV12 185 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 SSR3Q9UNL2 185 aa14.09□□□□□ -0.15
SMN2-215ENST00000628696 IGHV3-21A0A0B4J1V1 117 aa14.08□□□□□ -0.16
SMN2-215ENST00000628696 UBE2CO00762 179 aa14.08□□□□□ -0.16
SMN2-215ENST00000628696 OR13C7P0DN81 318 aa14.08□□□□□ -0.16
SMN2-215ENST00000628696 RPL35AP18077 110 aaKnown RBP14.08□□□□□ -0.16
SMN2-215ENST00000628696 MXD1Q05195 221 aa14.08□□□□□ -0.16
SMN2-215ENST00000628696 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
SMN2-215ENST00000628696 HOGA1Q86XE5 327 aa14.08□□□□□ -0.16
SMN2-215ENST00000628696 STPG3Q8N7X2 389 aa14.08□□□□□ -0.16
SMN2-215ENST00000628696 OR5H6Q8NGV6 325 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms