RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 KCTD12Q96CX2 325 aaKnown RBP13.03□□□□□ -0.32
HMGN3-203ENST00000620514 THAP7Q9BT49 309 aaPredicted RBP13.03□□□□□ -0.32
HMGN3-203ENST00000620514 FXYD6Q9H0Q3 95 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 NBEAL2Q6ZNJ1 2754 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 RLN1P04808 185 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 HLA-DMAP28067 261 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 SGPP2Q8IWX5 399 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 CCDC140Q96MF4 163 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 AIFM2Q9BRQ8 373 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 PLEKHA2Q9HB19 425 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 TMEM140Q9NV12 185 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 C19orf73Q9NVV2 129 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 PEMTQ9UBM1 199 aa13.02□□□□□ -0.33
HMGN3-203ENST00000620514 PGLYRP1O75594 196 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-203ENST00000620514 OR2C1O95371 312 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 HRH1P35367 487 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 TAS2R46P59540 309 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 KLK9Q2XQG4 91 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 LCN12Q6JVE5 192 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 CLEC19AQ6UXS0 136 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 Q8N402 240 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 DMBX1Q8NFW5 382 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 GPX8Q8TED1 209 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 NAA50Q9GZZ1 169 aaKnown RBP13.01□□□□□ -0.33
HMGN3-203ENST00000620514 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 RYR3Q15413 4870 aa13.01□□□□□ -0.33
HMGN3-203ENST00000620514 IGLV11-55A0A075B6I3 123 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 IGLC7A0M8Q6 106 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 MFSD2BA6NFX1 497 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 A8MZ25 164 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 HPGDSO60760 199 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 GGCTO75223 188 aaKnown RBP13□□□□□ -0.33
HMGN3-203ENST00000620514 APOA1P02647 267 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 SMIM18P0DKX4 95 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 ELK1P19419 428 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 SNX29P2Q8IUI4 249 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 CD300LFQ8TDQ1 290 aa13□□□□□ -0.33
HMGN3-203ENST00000620514 DHFRP00374 187 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 DEFA4P12838 97 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 HIST1H1BP16401 226 aaKnown RBP12.99□□□□□ -0.33
HMGN3-203ENST00000620514 F2RP25116 425 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 ARL3P36405 182 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 LPAR6P43657 344 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 CD300EQ496F6 205 aaPredicted RBP12.99□□□□□ -0.33
HMGN3-203ENST00000620514 FAM209BQ5JX69 171 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 OR10W1Q8NGF6 305 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 OR6F1Q8NGZ6 308 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 FCAMRQ8WWV6 532 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 BORCS5Q969J3 196 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 EEF1AKMT3Q96AZ1 226 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 COMMD5Q9GZQ3 224 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 ZMAT4Q9H898 229 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 COMMD9Q9P000 198 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
HMGN3-203ENST00000620514 SMIM31A0A1B0GVY4 71 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 C2orf70A6NJV1 201 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 GPR31O00270 319 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 FOLR2P14207 255 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 ZNF585BQ52M93 769 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 PHLDA2Q53GA4 152 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 DYNLRB2Q8TF09 96 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 DGCR14Q96DF8 476 aaKnown RBP12.98□□□□□ -0.33
HMGN3-203ENST00000620514 CMTM3Q96MX0 182 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 TM2D3Q9BRN9 247 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 ZC4H2Q9NQZ6 224 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 NSG2Q9Y328 171 aa12.98□□□□□ -0.33
HMGN3-203ENST00000620514 TEX50A0A1B0GTY4 177 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 MARCH11A6NNE9 402 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 ZNF785A8K8V0 405 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 LGALS9O00182 355 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 KRASP01116 189 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 G6PCP35575 357 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 ERVK-16P61578 105 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 GPHB5Q86YW7 130 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 CMTM1Q8IZ96 169 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 OR2K2Q8NGT1 345 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 CACNG8Q8WXS5 425 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
HMGN3-203ENST00000620514 SCPEP1Q9HB40 452 aa12.97□□□□□ -0.33
HMGN3-203ENST00000620514 RORCP51449 518 aa12.96□□□□□ -0.33
HMGN3-203ENST00000620514 TSPAN5P62079 268 aa12.96□□□□□ -0.33
HMGN3-203ENST00000620514 WT1-ASQ06250 92 aa12.96□□□□□ -0.33
HMGN3-203ENST00000620514 CTF1Q16619 201 aa12.96□□□□□ -0.33
HMGN3-203ENST00000620514 RNASE12Q5GAN4 147 aaKnown RBP12.96□□□□□ -0.33
HMGN3-203ENST00000620514 SRSF8Q9BRL6 282 aaKnown RBP12.96□□□□□ -0.33
HMGN3-203ENST00000620514 ZNF320A2RRD8 509 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 FAM25AB3EWG3 89 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 FAM25CB3EWG5 89 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 FAM25GB3EWG6 89 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 C3orf84H3BNL1 204 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 GABARAPO95166 117 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 CLEC3BP05452 202 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 FGF2P09038 288 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 CD7P09564 240 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 TRAPPC2P0DI81 140 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 TRAPPC2BP0DI82 140 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 OR13C7P0DN81 318 aa12.95□□□□□ -0.34
HMGN3-203ENST00000620514 RCVRNP35243 200 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms