RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 TRAV24A0A0B4J272 114 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 RNF224P0DH78 156 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 HOXA4Q00056 320 aaPredicted RBP8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 RPEL1Q2QD12 228 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 BSXQ3C1V8 233 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 PRNTQ86SH4 94 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 TNFSF18Q9UNG2 199 aa8.5□□□□□ -1.05
SMARCA1-205ENST00000617310 IGKV1D-8A0A087WSZ0 117 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 MPTX1A8MV57 137 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 PSPNO60542 156 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 IGHG3P01860 377 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 IL4P05112 153 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 CXCL2P19875 107 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 MFAP4P55083 255 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 KLRD1Q13241 179 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 MRPL30Q8TCC3 161 aaKnown RBP8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 LURAP1Q96LR2 239 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 DMRTA2Q96SC8 542 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 MSGN1A6NI15 193 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 UQCRFS1P47985 274 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 C11orf91Q3C1V1 193 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 TMEM219Q86XT9 240 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 ST6GALNAC3Q8NDV1 305 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF418Q8TF45 676 aaPredicted RBP8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 LSM10Q969L4 123 aaKnown RBP8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 CTXND1A0A1B0GTU2 59 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 Q71RC1 249 aaPredicted RBP8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF738Q8NE65 137 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 METTL26Q96S19 204 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 NLRC5Q86WI3 1866 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 DUXBA0A1W2PPF3 345 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 CLDN34H7C241 214 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 FCN1O00602 326 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 GPR183P32249 361 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 KRTDAPP60985 99 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF525Q8N782 197 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 LINC00312Q9Y6C7 94 aa8.49□□□□□ -1.05
SMARCA1-205ENST00000617310 PGPA6NDG6 321 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 FHITP49789 147 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 FA2HQ7L5A8 372 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 KIR3DL3Q8N743 410 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 RNF2Q99496 336 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 BPESC1Q9GZL8 116 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF430Q9H8G1 570 aaPredicted RBP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 RAB19A4D1S5 217 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 HELTA6NFD8 242 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 CA2P00918 260 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF250P15622 560 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 IGFBP3P17936 291 aaPredicted RBP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 EGR1P18146 543 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 RAB5AP20339 215 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 MDKP21741 143 aaPredicted RBP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 RPL30P62888 115 aaKnown RBP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 HGFACQ04756 655 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 TAF15Q92804 592 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 TXN2Q99757 166 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 TM2D1Q9BX74 207 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 PROK2Q9HC23 129 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 ZNF581Q9P0T4 197 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 FN1P02751 2386 aaKnown RBP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 IGKV1-27A0A075B6S5 117 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 DEDDO75618 318 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 MGPP08493 103 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 CD81P60033 236 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 TMEM187Q14656 261 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 LRRC75BQ2VPJ9 315 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 FAM106AQ4KMX7 169 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 OR4A47Q6IF82 309 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 RNASEKQ6P5S7 137 aaKnown RBP8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 SLC16A13Q7RTY0 426 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 NHLRC2Q8NBF2 726 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 DCAF16Q9NXF7 216 aa8.48□□□□□ -1.05
SMARCA1-205ENST00000617310 SAA2-SAA4A0A096LPE2 208 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 P01737 135 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 SAA2P0DJI9 122 aaPredicted RBP8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 ATP5G2Q06055 141 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 C10orf55Q5SWW7 151 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 RSPO3Q9BXY4 272 aaPredicted RBP8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 RRHO14718 337 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 TIMM23O14925 209 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 ADIPOQQ15848 244 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 RTN4RL2Q86UN3 420 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 COMMD1Q8N668 190 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 OR10G8Q8NGN5 311 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 TOLLIPQ9H0E2 274 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 GAR1Q9NY12 217 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 SRRM5B3KS81 715 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 SRSF10O75494 262 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 DLX1P56177 255 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 TCTEX1D1Q8N7M0 179 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 SIGLECL1Q8N7X8 197 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 OR11H4Q8NGC9 324 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 OR2D3Q8NGH3 330 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
SMARCA1-205ENST00000617310 PHYHIPLQ96FC7 376 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms