RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 HINT2Q9BX68 163 aa14.17□□□□□ -0.14
NEK3-206ENST00000611833 AURKAIP1Q9NWT8 199 aaPredicted RBP14.17□□□□□ -0.14
NEK3-206ENST00000611833 DSCAML1Q8TD84 2053 aa14.17□□□□□ -0.14
NEK3-206ENST00000611833 TET2Q6N021 2002 aaPredicted RBP14.17□□□□□ -0.14
NEK3-206ENST00000611833 TRBV23-1A0A0A0MS06 115 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 TNFSF4P23510 183 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 STUMQ69YW2 141 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 LINC01551Q86U37 167 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 ADTRPQ96IZ2 230 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 PACRGQ96M98 296 aaPredicted RBP14.16□□□□□ -0.14
NEK3-206ENST00000611833 SFXN3Q9BWM7 321 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 FOXA2Q9Y261 457 aaPredicted RBP14.16□□□□□ -0.14
NEK3-206ENST00000611833 AKAP13Q12802 2813 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 STAG3L2P0CL84 134 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 STAG3L3P0CL85 134 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 CEACAM8P31997 349 aaPredicted RBP14.16□□□□□ -0.14
NEK3-206ENST00000611833 TMEM183AQ8IXX5 376 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 GAFA1Q96PS6 74 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 DERL1Q9BUN8 251 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 TMEM14BQ9NUH8 114 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 IDI2-AS1Q9NZ38 188 aa14.16□□□□□ -0.14
NEK3-206ENST00000611833 CRYABP02511 175 aaKnown RBP14.15□□□□□ -0.14
NEK3-206ENST00000611833 ARSJQ5FYB0 599 aaPredicted RBP14.15□□□□□ -0.14
NEK3-206ENST00000611833 TEPPQ6URK8 271 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 HIST1H2BLQ99880 126 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 RAI1Q7Z5J4 1906 aaPredicted RBP14.15□□□□□ -0.14
NEK3-206ENST00000611833 ICE1Q9Y2F5 2266 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 A8MXE2 369 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 GGCTO75223 188 aaKnown RBP14.15□□□□□ -0.14
NEK3-206ENST00000611833 IL6RP08887 468 aaPredicted RBP14.15□□□□□ -0.14
NEK3-206ENST00000611833 IRF2P14316 349 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 TCF15Q12870 199 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 RAB31Q13636 194 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 TCF23Q7RTU1 214 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 FAM216BQ8N7L0 139 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 TXNDC17Q9BRA2 123 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 TMEM204Q9BSN7 226 aa14.15□□□□□ -0.14
NEK3-206ENST00000611833 LSM4Q9Y4Z0 139 aaKnown RBP14.15□□□□□ -0.14
NEK3-206ENST00000611833 TANC2Q9HCD6 1990 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 XKRY2A2RUG3 117 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 TMPRSS2O15393 492 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 KLK10O43240 276 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 CA2P00918 260 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 FAM209BQ5JX69 171 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 FAM57AQ8TBR7 257 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 OR51B2Q9Y5P1 312 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 ZNF729A6NN14 1252 aaPredicted RBP14.14□□□□□ -0.15
NEK3-206ENST00000611833 CD40P25942 277 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 FAM78BQ5VT40 261 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 STPG3Q8N7X2 389 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 ZNF439Q8NDP4 499 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 OR1P1Q8NH06 330 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 C1orf159Q96HA4 380 aa14.14□□□□□ -0.15
NEK3-206ENST00000611833 CD99P14209 185 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 MYOD1P15172 320 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 CCKARP32238 428 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 TMEM37Q8WXS4 190 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 FUT9Q9Y231 359 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 PGPEP1LA6NFU8 196 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 MMP23AO75900 390 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 HIST1H1BP16401 226 aaKnown RBP14.13□□□□□ -0.15
NEK3-206ENST00000611833 RHOBP62745 196 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 EFNB3Q15768 340 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 C9orf152Q5JTZ5 239 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 CISD2Q8N5K1 135 aaKnown RBP14.13□□□□□ -0.15
NEK3-206ENST00000611833 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
NEK3-206ENST00000611833 PRNDQ9UKY0 176 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 PLCE1Q9P212 2302 aa14.13□□□□□ -0.15
NEK3-206ENST00000611833 C1QTNF9P0C862 333 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 ACTL10Q5JWF8 245 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 PLEKHA3Q9HB20 300 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 SEPSECSQ9HD40 501 aaKnown RBP14.12□□□□□ -0.15
NEK3-206ENST00000611833 DCAF16Q9NXF7 216 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 TP53TG5Q9Y2B4 290 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 BSNQ9UPA5 3926 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 SCO2A0A1W2PP80 73 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 J3QR06 171 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 TYMSP04818 313 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 NDUFB7P17568 137 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 GCHFRP30047 84 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 NUBP1P53384 320 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 RTL8BQ17RB0 113 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 KRTCAP3Q53RY4 240 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 ZNF114Q8NC26 417 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 ACY3Q96HD9 319 aa14.12□□□□□ -0.15
NEK3-206ENST00000611833 MDFIC2A0A1B0GVS7 189 aa14.11□□□□□ -0.15
NEK3-206ENST00000611833 MT-CO2P00403 227 aa14.11□□□□□ -0.15
NEK3-206ENST00000611833 RPL29P47914 159 aaKnown RBP14.11□□□□□ -0.15
NEK3-206ENST00000611833 CCL8P80075 99 aa14.11□□□□□ -0.15
NEK3-206ENST00000611833 LCN2P80188 198 aa14.11□□□□□ -0.15
NEK3-206ENST00000611833 SPATA31B1PQ5VZV4 182 aa14.11□□□□□ -0.15
NEK3-206ENST00000611833 SNRNP40Q96DI7 357 aaKnown RBP14.11□□□□□ -0.15
NEK3-206ENST00000611833 SLC35D1Q9NTN3 355 aa14.11□□□□□ -0.15
NEK3-206ENST00000611833 SMG1Q96Q15 3661 aaKnown RBP14.11□□□□□ -0.15
NEK3-206ENST00000611833 ATMQ13315 3056 aa14.11□□□□□ -0.15
NEK3-206ENST00000611833 hADV38S2A0JD32 116 aa14.1□□□□□ -0.15
NEK3-206ENST00000611833 CT45A6P0DMU7 189 aa14.1□□□□□ -0.15
NEK3-206ENST00000611833 CT45A5P0DMU8 189 aa14.1□□□□□ -0.15
NEK3-206ENST00000611833 CT45A7P0DMV0 189 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms