RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RAB32Q13637 225 aa14.83□□□□□ -0.04
SSBP4-212ENST00000601919 CXorf66Q5JRM2 361 aaPredicted RBP14.83□□□□□ -0.04
SSBP4-212ENST00000601919 RASL11BQ9BPW5 248 aa14.83□□□□□ -0.04
SSBP4-212ENST00000601919 QTRT1Q9BXR0 403 aaKnown RBP14.83□□□□□ -0.04
SSBP4-212ENST00000601919 PLSCR3Q9NRY6 295 aa14.83□□□□□ -0.04
SSBP4-212ENST00000601919 LSM5Q9Y4Y9 91 aaKnown RBP14.83□□□□□ -0.04
SSBP4-212ENST00000601919 K7EPK0 472 aa14.82□□□□□ -0.04
SSBP4-212ENST00000601919 FGF16O43320 207 aa14.82□□□□□ -0.04
SSBP4-212ENST00000601919 C1QBP02746 253 aa14.82□□□□□ -0.04
SSBP4-212ENST00000601919 SRD5A1P18405 259 aa14.82□□□□□ -0.04
SSBP4-212ENST00000601919 HSPE1P61604 102 aaKnown RBP14.82□□□□□ -0.04
SSBP4-212ENST00000601919 ZFP69Q49AA0 526 aa14.82□□□□□ -0.04
SSBP4-212ENST00000601919 PDLIM3Q53GG5 364 aaPredicted RBP14.82□□□□□ -0.04
SSBP4-212ENST00000601919 MRPL41Q8IXM3 137 aaKnown RBP14.82□□□□□ -0.04
SSBP4-212ENST00000601919 FAM71E2Q8N5Q1 922 aa14.82□□□□□ -0.04
SSBP4-212ENST00000601919 OR1L8Q8NGR8 309 aa14.82□□□□□ -0.04
SSBP4-212ENST00000601919 WDR89Q96FK6 387 aaPredicted RBP14.82□□□□□ -0.04
SSBP4-212ENST00000601919 CEBPZOSA8MTT3 80 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 SYNGR2O43760 224 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 NXPH3O95157 252 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 LY6EQ16553 131 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 C11orf87Q6NUJ2 197 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 PRSS54Q6PEW0 395 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 Q8N9W7 124 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 ZNF48Q96MX3 618 aaPredicted RBP14.81□□□□□ -0.04
SSBP4-212ENST00000601919 CIB3Q96Q77 187 aaPredicted RBP14.81□□□□□ -0.04
SSBP4-212ENST00000601919 RAB40CQ96S21 281 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 ENY2Q9NPA8 101 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 TPSG1Q9NRR2 321 aa14.81□□□□□ -0.04
SSBP4-212ENST00000601919 E5RGE8 158 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 L7N2F9 121 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 SSSCA1O60232 199 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 GPR137BO60478 399 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 DEDDO75618 318 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 CNIH1O95406 144 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 IGHV4-59P01825 116 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 POLR2GP62487 172 aaKnown RBP eCLIP14.8□□□□□ -0.04
SSBP4-212ENST00000601919 VAMP2P63027 116 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 CD300CQ08708 224 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 TNXAQ16473 311 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 TUSC1Q2TAM9 212 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 FBLN7Q53RD9 439 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 TMEM219Q86XT9 240 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 TMEM86BQ8N661 226 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 HYLS1Q96M11 299 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 MAGT1Q9H0U3 335 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 RBKSQ9H477 322 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 VPREB3Q9UKI3 123 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 TET2Q6N021 2002 aaPredicted RBP14.8□□□□□ -0.04
SSBP4-212ENST00000601919 TNCP24821 2201 aa14.8□□□□□ -0.04
SSBP4-212ENST00000601919 TRAV14DV4A0A0A6YYC5 116 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 TEX50A0A1B0GTY4 177 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 A0A1W2PN81 502 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 SMLR1H3BR10 107 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 HLA-DRB1P01911 266 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 SLC25A4P12235 298 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 HIVEP2P31629 2446 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 CHRNA7P36544 502 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 RPL27AP46776 148 aaKnown RBP14.79□□□□□ -0.04
SSBP4-212ENST00000601919 COMPP49747 757 aaPredicted RBP14.79□□□□□ -0.04
SSBP4-212ENST00000601919 GNB1P62873 340 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 PRCDQ00LT1 54 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 PJVKQ0ZLH3 352 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 ZNF562Q6V9R5 426 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 C5orf56Q8N8D9 126 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 DTD1Q8TEA8 209 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 HINT2Q9BX68 163 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 HIPK2Q9H2X6 1198 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 PLEKHA3Q9HB20 300 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 MBD2Q9UBB5 411 aa14.79□□□□□ -0.04
SSBP4-212ENST00000601919 RCL1Q9Y2P8 373 aaKnown RBP14.79□□□□□ -0.04
SSBP4-212ENST00000601919 ZNF469Q96JG9 3925 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-212ENST00000601919 HOXA3O43365 443 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-212ENST00000601919 CHST1O43916 411 aa14.78□□□□□ -0.04
SSBP4-212ENST00000601919 CA2P00918 260 aa14.78□□□□□ -0.04
SSBP4-212ENST00000601919 HNRNPCP07910 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
SSBP4-212ENST00000601919 NUP62P37198 522 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-212ENST00000601919 HOXA1P49639 335 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-212ENST00000601919 TAS2R30P59541 319 aa14.78□□□□□ -0.04
SSBP4-212ENST00000601919 RPL23AP62750 156 aaKnown RBP14.78□□□□□ -0.04
SSBP4-212ENST00000601919 Q5BKY6 102 aa14.78□□□□□ -0.04
SSBP4-212ENST00000601919 HSD17B13Q7Z5P4 300 aaPredicted RBP14.78□□□□□ -0.04
SSBP4-212ENST00000601919 NDUFA4L2Q9NRX3 87 aa14.78□□□□□ -0.04
SSBP4-212ENST00000601919 WSB1Q9Y6I7 421 aa14.78□□□□□ -0.04
SSBP4-212ENST00000601919 FXYD6-FXYD2A0A087WZ82 144 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 FCN1O00602 326 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 LYL1P12980 280 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 RPP30P78346 268 aaKnown RBP14.77□□□□□ -0.05
SSBP4-212ENST00000601919 FXYD3Q14802 87 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 MRGPRG-AS1Q2M3A8 158 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 TMEM65Q6PI78 240 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 ZNF546Q86UE3 836 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 NOXA1Q86UR1 476 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 ZNF418Q8TF45 676 aaPredicted RBP14.77□□□□□ -0.05
SSBP4-212ENST00000601919 DCUN1D4Q92564 292 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 SMIM8Q96KF7 97 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 SRSF8Q9BRL6 282 aaKnown RBP14.77□□□□□ -0.05
SSBP4-212ENST00000601919 RNF126Q9BV68 326 aa14.77□□□□□ -0.05
SSBP4-212ENST00000601919 HEYLQ9NQ87 328 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms