RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RNF24Q9Y225 148 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 FOXA2Q9Y261 457 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 ERGIC3Q9Y282 383 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 LSM2Q9Y333 95 aaKnown RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 AMMECR1Q9Y4X0 333 aaPredicted RBP2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 HILPDAQ9Y5L2 63 aa2.64□□□□□ -1.99
CKS1BP3-201ENST00000600888 NBEAL2Q6ZNJ1 2754 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 TMEM30CPA0ZSE6 113 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 MCRIP1C9JLW8 97 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 H0YHG0 523 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 GAPDHP04406 335 aaKnown RBP2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 MGMTP16455 207 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 SRMP19623 302 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 SERPINA2P20848 420 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 FUT3P21217 361 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 PSMA1P25786 263 aaKnown RBP2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 CD1BP29016 333 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC6A1P30531 599 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 GLP1RP43220 463 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 HSPA13P48723 471 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 BLCAPP62952 87 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 HTD2P86397 168 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 DEFA6Q01524 100 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 GABPB1Q06547 395 aaPredicted RBP2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 MADCAM1Q13477 382 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 TPBGQ13641 420 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRAM1Q15629 374 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 ACSM3Q53FZ2 586 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 UTF1Q5T230 341 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 C6orf183Q5T699 404 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 GLT8D1Q68CQ7 371 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 GLIPR1L1Q6UWM5 242 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC25A48Q6ZT89 311 aaKnown RBP2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 STHQ8IWL8 128 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZFP41Q8N8Y5 198 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF439Q8NDP4 499 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 WFDC9Q8NEX5 89 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 BPIFB6Q8NFQ5 453 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR4F17Q8NGA8 305 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR8H1Q8NGG4 311 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR6M1Q8NGM8 313 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR10K1Q8NGX5 313 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 RPEQ96AT9 228 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 MRPL53Q96EL3 112 aaKnown RBP2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR4F4Q96R69 305 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 TM2D1Q9BX74 207 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 ANKRD60Q9BZ19 345 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 FAM192AQ9GZU8 254 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 CST11Q9H112 138 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 Q9HAA7 133 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 SCN3BQ9NY72 215 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 MLXQ9UH92 298 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 SIGLEC9Q9Y336 463 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 TPRKBQ9Y3C4 175 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 LRRC42Q9Y546 428 aa2.63□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRBV6-6A0A0A6YYG2 114 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHV1-3A0A0C4DH29 117 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 FAM168BA1KXE4 195 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 ERICH4A6NGS2 130 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TMEM14DPA8MWL7 114 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 C12orf77C9JDV5 145 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 AIPO00170 330 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 ITGB1BP1O14713 200 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 HSD17B6O14756 317 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC22A1O15245 554 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 LANCL1O43813 399 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 YPEL1O60688 119 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 MRPS14O60783 128 aaKnown RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 PDCD6O75340 191 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 ARL6IP5O75915 188 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 NAPSAO96009 420 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHG2P01859 326 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 MAS1P04201 325 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 FCER2P06734 321 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 UCHL1P09936 223 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 CD28P10747 220 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 GALP22466 123 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 CRHBPP24387 322 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 NFYBP25208 207 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 IL3RAP26951 378 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 SSTR5P35346 364 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 VHLP40337 213 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 VDAC2P45880 294 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 PSMD7P51665 324 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 AQP4P55087 323 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 QRFPP83859 136 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 MLLT11Q13015 90 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 DIAPH2-AS1Q14236 149 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 CNPY1Q3B7I2 92 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 ABCA11PQ4W5N1 156 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 MORN2Q502X0 79 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 HSD17B12Q53GQ0 312 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 RBM48Q5RL73 367 aaKnown RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 SYT6Q5T7P8 510 aaPredicted RBP2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB12Q6IQ22 244 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 FAM71F2Q6NXP2 309 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF880Q6PDB4 577 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 CD200R1LQ6Q8B3 271 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 TMEM91Q6ZNR0 172 aa2.62□□□□□ -1.99
CKS1BP3-201ENST00000600888 PRSS48Q7RTY5 328 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms