RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 HBZP02008 142 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 CD40P25942 277 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 IL3RAP26951 378 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 IZUMO4Q1ZYL8 232 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 Q6ZWC4 215 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 RFESDQ8TAC1 157 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 PRR7Q8TB68 274 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 RPUSD4Q96CM3 377 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 RAB40CQ96S21 281 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 PARD6GQ9BYG4 376 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 MANBALQ9NQG1 85 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 A0A0G2JRQ6 117 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 OOEPA6NGQ2 149 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 CCL25O15444 150 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 NUPR1O60356 82 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 GYPAP02724 150 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 PSMB3P49720 205 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 CLEC12BQ2HXU8 276 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 TDRG1Q3Y452 100 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 CST9LP1Q5W188 147 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 TMEM144Q7Z5S9 345 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 OR4B1Q8NGF8 309 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 OR13A1Q8NGR1 328 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 DCTN5Q9BTE1 182 aa14.17□□□□□ -0.14
SHKBP1-205ENST00000594973 C3orf36Q3SXR2 165 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 WFDC8Q8IUA0 241 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 GCSAMQ8N6F7 178 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 ITLN1Q8WWA0 313 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 CIB3Q96Q77 187 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 MSRB2Q9Y3D2 182 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 PAM16Q9Y3D7 125 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 IGKV1D-17A0A075B6S4 117 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 PIGBOS1A0A0B4J2F0 54 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 SRRM5B3KS81 715 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 C16orf97H3BN30 126 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 MMP23AO75900 390 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 DRAM1Q8N682 238 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 OR2D3Q8NGH3 330 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 SLC45A2Q9UMX9 530 aa14.16□□□□□ -0.14
SHKBP1-205ENST00000594973 IGLV3-9A0A075B6K5 115 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 IGHV3-43A0A0B4J1X8 118 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 TOMM40O96008 361 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 IGHV3-43DP0DP04 118 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 SLC25A6P12236 298 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 FOXL1Q12952 345 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 LRRC75BQ2VPJ9 315 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 FAM201AQ5SY85 155 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 NINJ1Q92982 152 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 LHX4Q969G2 390 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 OR2D2Q9H210 308 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 SLC39A9Q9NUM3 307 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 NDUFB8O95169 186 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 HNF1AP20823 631 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 SELENOVP59797 346 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 UBE2V1Q13404 147 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 ATP6V1FQ16864 119 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 LTC4SQ16873 150 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 ZNF808Q8N4W9 903 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 GPR146Q96CH1 333 aa14.15□□□□□ -0.14
SHKBP1-205ENST00000594973 A0A0U1RQK1 487 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF320A2RRD8 509 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 DEFB108AA8MXU0 73 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 IGKV1-39P01597 117 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 IGKV1D-39P04432 117 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 YPEL3P61236 119 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF525Q8N782 197 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNRF1Q8ND25 227 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 RAXQ9Y2V3 346 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 PPBPP02775 128 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 TMEM108Q6UXF1 575 aa14.14□□□□□ -0.15
SHKBP1-205ENST00000594973 FAM78BQ5VT40 261 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 PLPPR2Q96GM1 343 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 LIN7CQ9NUP9 197 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 CHD8Q9HCK8 2581 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 OR5G3P0C626 314 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF585BQ52M93 769 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 Q6ZRM9 215 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF645Q8N7E2 425 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 UQCR10Q9UDW1 63 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF835Q9Y2P0 537 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 TIMM9Q9Y5J7 89 aa14.13□□□□□ -0.15
SHKBP1-205ENST00000594973 IGHV1-46P01743 117 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 TMPRSS3P57727 454 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 HBG1P69891 147 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 HBG2P69892 147 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 TNFAIP6P98066 277 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 MMDQ15546 238 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF295-AS1Q8N0V1 137 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 STPG4Q8N801 248 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 OR5AU1Q8NGC0 362 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 VN1R17PQ8TDU5 208 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 FAM122AQ96E09 287 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 HSPB9Q9BQS6 159 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 ELOVL5Q9NYP7 299 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 CACNG5Q9UF02 275 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 DIDO1Q9BTC0 2240 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 A0A1B0GUS0 222 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 IGKV1-5P01602 117 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 EDDM3BP56851 147 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 TMEM267Q0VDI3 215 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms