RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 PLET1Q6UQ28 207 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 IDO2Q6ZQW0 420 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 PUSL1Q8N0Z8 303 aaKnown RBP6.37□□□□□ -1.39
SMAD4-215ENST00000592911 CBR4Q8N4T8 237 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 POM121L12Q8N7R1 296 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 OR11H2Q8NH07 326 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 OR4S2Q8NH73 311 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 ZNF502Q8TBZ5 544 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 CD300LFQ8TDQ1 290 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 BSCL2Q96G97 398 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-215ENST00000592911 OR2A7Q96R45 310 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 NICN1Q9BSH3 213 aa6.37□□□□□ -1.39
SMAD4-215ENST00000592911 TRAV2A0A0B4J234 112 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 C15orf61A6NNL5 157 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 IGLL5B9A064 214 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 CIB2O75838 187 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 DFFBO76075 338 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 HRASP01112 189 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 CTXN2P0C2S0 81 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 DEFA4P12838 97 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 MIFP14174 115 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 WNT4P56705 351 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 ARL6IP1Q15041 203 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 MSMO1Q15800 293 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 UNQ9165/PRO28630Q6UXU0 137 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 LRRTM1Q86UE6 522 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 ZNF645Q8N7E2 425 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 ZNF555Q8NEP9 628 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 HSD17B10Q99714 261 aaKnown RBP6.36□□□□□ -1.39
SMAD4-215ENST00000592911 AASSQ9UDR5 926 aa6.36□□□□□ -1.39
SMAD4-215ENST00000592911 RBM7Q9Y580 266 aaKnown RBP6.36□□□□□ -1.39
SMAD4-215ENST00000592911 A0A0A6YYD4 124 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 A0A1W2PPK0 400 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 LINC00473A8K010 186 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 SLC17A2O00624 439 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 SOCS1O15524 211 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 TGOLN2O43493 480 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 IL6RP08887 468 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-215ENST00000592911 CD3GP09693 182 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 RPL35AP18077 110 aaKnown RBP6.35□□□□□ -1.39
SMAD4-215ENST00000592911 FCGR2BP31994 310 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-215ENST00000592911 TMEM50BP56557 158 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 RPL8P62917 257 aaKnown RBP6.35□□□□□ -1.39
SMAD4-215ENST00000592911 TMEM187Q14656 261 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 OR10K2Q6IF99 312 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 KCTD9Q7L273 389 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 H1FOOQ8IZA3 346 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-215ENST00000592911 C5orf30Q96GV9 206 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 ARHGAP5-AS1Q96IT6 56 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 FAM210BQ96KR6 192 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 GINS4Q9BRT9 223 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 HDHD3Q9BSH5 251 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-215ENST00000592911 PECRQ9BY49 303 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 BET1LQ9NYM9 111 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 CLEC2DQ9UHP7 191 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 PAIP2BQ9ULR5 123 aaKnown RBP6.35□□□□□ -1.39
SMAD4-215ENST00000592911 ETV7Q9Y603 341 aa6.35□□□□□ -1.39
SMAD4-215ENST00000592911 AGRNO00468 2067 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 IGHV4-4A0A075B6R2 117 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 HMX3A6NHT5 357 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 MYL12BO14950 172 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 BET1O15155 118 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 RTL8CO15255 209 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 FCGR3BO75015 233 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 FCGR3AP08637 254 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 UCHL1P09936 223 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 GPR183P32249 361 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 PAFAH1B2P68402 229 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 ACSM3Q53FZ2 586 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 HSD17B12Q53GQ0 312 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 RBM48Q5RL73 367 aaKnown RBP6.34□□□□□ -1.39
SMAD4-215ENST00000592911 C10orf55Q5SWW7 151 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 ZNF66Q6ZN08 573 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 CADM3Q8N126 398 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 Q8NAQ8 132 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 CMTM3Q96MX0 182 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 DCUN1D5Q9BTE7 237 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 C8orf4Q9NR00 106 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 PRR13Q9NZ81 148 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 UBQLN2Q9UHD9 624 aa6.34□□□□□ -1.39
SMAD4-215ENST00000592911 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-215ENST00000592911 ZNF705EA8MWA4 302 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-215ENST00000592911 RBFOX2O43251 390 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMAD4-215ENST00000592911 XRCC3O43542 346 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 HLA-DQB1P01920 261 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 SPP1P10451 314 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 AREGP15514 252 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 HLA-GP17693 338 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 DTYMKP23919 212 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 GADD45AP24522 165 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 RELQ04864 619 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-215ENST00000592911 ST3GAL4Q11206 333 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 TRAM1Q15629 374 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 POU2AF1Q16633 256 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 SMN1Q16637 294 aaKnown RBP6.33□□□□□ -1.4
SMAD4-215ENST00000592911 IGSF11Q5DX21 431 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 MORN3Q6PF18 240 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-215ENST00000592911 ZFP41Q8N8Y5 198 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 PYDC1Q8WXC3 89 aa6.33□□□□□ -1.4
SMAD4-215ENST00000592911 CYYR1Q96J86 154 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms