RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ABHD5Q8WTS1 349 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 C22orf15Q8WYQ4 148 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 ST8SIA2Q92186 375 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 ST6GALNAC6Q969X2 333 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 ATP5SQ99766 215 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 QTRT1Q9BXR0 403 aaKnown RBP5.01□□□□□ -1.61
LIG3-206ENST00000586058 SMIM3Q9BZL3 60 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 MMP26Q9NRE1 261 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 KCNIP2Q9NS61 270 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 METTL1Q9UBP6 276 aaKnown RBP5.01□□□□□ -1.61
LIG3-206ENST00000586058 FBXL17Q9UF56 701 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 PITPNC1Q9UKF7 332 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 TCF19Q9Y242 345 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 U3KQ87 197 aa5.01□□□□□ -1.61
LIG3-206ENST00000586058 UBR5O95071 2799 aaPredicted RBP5.01□□□□□ -1.61
LIG3-206ENST00000586058 ANKRD17O75179 2603 aaKnown RBP5.01□□□□□ -1.61
LIG3-206ENST00000586058 ZNF462Q96JM2 2506 aa5□□□□□ -1.61
LIG3-206ENST00000586058 KALRNO60229 2985 aa5□□□□□ -1.61
LIG3-206ENST00000586058 IGHV3-72A0A0B4J1Y9 119 aa5□□□□□ -1.61
LIG3-206ENST00000586058 IGHV1-69DA0A0B4J2H0 117 aa5□□□□□ -1.61
LIG3-206ENST00000586058 A0A1W2PPI3 338 aa5□□□□□ -1.61
LIG3-206ENST00000586058 FAM24AA6NFZ4 105 aa5□□□□□ -1.61
LIG3-206ENST00000586058 NCBP2LA6PVI3 153 aaKnown RBP5□□□□□ -1.61
LIG3-206ENST00000586058 C17orf112F2Z3M2 114 aa5□□□□□ -1.61
LIG3-206ENST00000586058 H0YIZ8 118 aa5□□□□□ -1.61
LIG3-206ENST00000586058 CORTO00230 105 aa5□□□□□ -1.61
LIG3-206ENST00000586058 PROP1O75360 226 aa5□□□□□ -1.61
LIG3-206ENST00000586058 SCGB2A1O75556 95 aa5□□□□□ -1.61
LIG3-206ENST00000586058 VENTXO95231 258 aa5□□□□□ -1.61
LIG3-206ENST00000586058 CNIH1O95406 144 aa5□□□□□ -1.61
LIG3-206ENST00000586058 TGFAP01135 160 aa5□□□□□ -1.61
LIG3-206ENST00000586058 IGHV1-69P01742 117 aa5□□□□□ -1.61
LIG3-206ENST00000586058 IFNA4P05014 189 aa5□□□□□ -1.61
LIG3-206ENST00000586058 P0C879 139 aa5□□□□□ -1.61
LIG3-206ENST00000586058 HNF1AP20823 631 aa5□□□□□ -1.61
LIG3-206ENST00000586058 NPY1RP25929 384 aa5□□□□□ -1.61
LIG3-206ENST00000586058 HTR2BP41595 481 aa5□□□□□ -1.61
LIG3-206ENST00000586058 RPL27AP46776 148 aaKnown RBP5□□□□□ -1.61
LIG3-206ENST00000586058 COMPP49747 757 aaPredicted RBP5□□□□□ -1.61
LIG3-206ENST00000586058 DLX1P56177 255 aa5□□□□□ -1.61
LIG3-206ENST00000586058 RAB2AP61019 212 aa5□□□□□ -1.61
LIG3-206ENST00000586058 HSPE1P61604 102 aaKnown RBP5□□□□□ -1.61
LIG3-206ENST00000586058 GNB1P62873 340 aa5□□□□□ -1.61
LIG3-206ENST00000586058 PRCDQ00LT1 54 aa5□□□□□ -1.61
LIG3-206ENST00000586058 PAX2Q02962 417 aa5□□□□□ -1.61
LIG3-206ENST00000586058 PAX8Q06710 450 aa5□□□□□ -1.61
LIG3-206ENST00000586058 SLC38A11Q08AI6 406 aa5□□□□□ -1.61
LIG3-206ENST00000586058 EXOSC2Q13868 293 aaKnown RBP5□□□□□ -1.61
LIG3-206ENST00000586058 CLINT1Q14677 625 aa5□□□□□ -1.61
LIG3-206ENST00000586058 ATP6V1FQ16864 119 aa5□□□□□ -1.61
LIG3-206ENST00000586058 IZUMO4Q1ZYL8 232 aa5□□□□□ -1.61
LIG3-206ENST00000586058 LAMTOR1Q6IAA8 161 aa5□□□□□ -1.61
LIG3-206ENST00000586058 OR8G2PQ6IF36 304 aa5□□□□□ -1.61
LIG3-206ENST00000586058 PPP1R27Q86WC6 154 aa5□□□□□ -1.61
LIG3-206ENST00000586058 BAP18Q8IXM2 172 aa5□□□□□ -1.61
LIG3-206ENST00000586058 PUSL1Q8N0Z8 303 aaKnown RBP5□□□□□ -1.61
LIG3-206ENST00000586058 TMEM252Q8N6L7 170 aa5□□□□□ -1.61
LIG3-206ENST00000586058 TMEM217Q8N7C4 229 aa5□□□□□ -1.61
LIG3-206ENST00000586058 ZNF709Q8N972 641 aa5□□□□□ -1.61
LIG3-206ENST00000586058 SLC24A4Q8NFF2 622 aa5□□□□□ -1.61
LIG3-206ENST00000586058 OR5C1Q8NGR4 320 aa5□□□□□ -1.61
LIG3-206ENST00000586058 STOML3Q8TAV4 291 aa5□□□□□ -1.61
LIG3-206ENST00000586058 SCARB1Q8WTV0 552 aa5□□□□□ -1.61
LIG3-206ENST00000586058 GNPNAT1Q96EK6 184 aaPredicted RBP5□□□□□ -1.61
LIG3-206ENST00000586058 TBX15Q96SF7 602 aa5□□□□□ -1.61
LIG3-206ENST00000586058 RASL11BQ9BPW5 248 aa5□□□□□ -1.61
LIG3-206ENST00000586058 RNF126Q9BV68 326 aa5□□□□□ -1.61
LIG3-206ENST00000586058 REG4Q9BYZ8 158 aa5□□□□□ -1.61
LIG3-206ENST00000586058 TMEM14BQ9NUH8 114 aa5□□□□□ -1.61
LIG3-206ENST00000586058 ARID1AO14497 2285 aa5□□□□□ -1.61
LIG3-206ENST00000586058 DOPEY2Q9Y3R5 2298 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 UBE2L5PA0A1B0GUS4 154 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 IGSF23A1L1A6 192 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 SMCO3A2RU48 225 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 MSGN1A6NI15 193 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 LY6LH3BQJ8 138 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 TEX46H3BTG2 121 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 RRHO14718 337 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 SOX15O60248 233 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 CST7O76096 145 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 METTL15P1P0C7V9 234 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 BRWD1-AS2P59051 145 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 LINC00205P59089 165 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 KRTAP10-9P60411 292 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 PRB3Q04118 309 aaPredicted RBP4.99□□□□□ -1.61
LIG3-206ENST00000586058 AKR1C1Q04828 323 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 RAB31Q13636 194 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 DIAPH2-AS1Q14236 149 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 TMEM249Q2WGJ8 235 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 AARDQ4LEZ3 155 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 PDLIM3Q53GG5 364 aaPredicted RBP4.99□□□□□ -1.61
LIG3-206ENST00000586058 SPINK9Q5DT21 86 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 UTF1Q5T230 341 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 CYB5R2Q6BCY4 276 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 ETFRF1Q6IPR1 90 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 ALKAL2Q6UX46 152 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 Q6ZRM9 215 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 LHFPL4Q7Z7J7 247 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 UBAC2Q8NBM4 344 aa4.99□□□□□ -1.61
LIG3-206ENST00000586058 OR1L6Q8NGR2 347 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms