RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 ZNF486Q96H40 463 aaPredicted RBP20.96■□□□□ 0.95
SMARCD2-210ENST00000584400 SLIRPQ9GZT3 109 aaKnown RBP20.96■□□□□ 0.95
SMARCD2-210ENST00000584400 CEPT1Q9Y6K0 416 aa20.96■□□□□ 0.95
SMARCD2-210ENST00000584400 HMX3A6NHT5 357 aa20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 MARCH11A6NNE9 402 aa20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 TEX22C9J3V5 150 aa20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 CTDSPLO15194 276 aa20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 IL6RP08887 468 aaPredicted RBP20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 RHOGP84095 191 aa20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 DCTN2Q13561 401 aaKnown RBP20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 ZNF343Q6P1L6 599 aa20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 NECAP1Q8NC96 275 aa20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 SRSF8Q9BRL6 282 aaKnown RBP20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 PEF1Q9UBV8 284 aaKnown RBP20.95■□□□□ 0.94
SMARCD2-210ENST00000584400 RAB3DO95716 219 aa20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 CD74P04233 296 aa20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 ATP5G2Q06055 141 aa20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 THOC7Q6I9Y2 204 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 STEAP1BQ6NZ63 245 aa20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 TBC1D26Q86UD7 250 aa20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 MCFD2Q8NI22 146 aa20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 SMIM4Q8WVI0 70 aa20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 RSL24D1Q9UHA3 163 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-210ENST00000584400 TRBV9A0A0B4J1U6 114 aa20.93■□□□□ 0.94
SMARCD2-210ENST00000584400 PGAM2P15259 253 aa20.93■□□□□ 0.94
SMARCD2-210ENST00000584400 MEF2DQ14814 521 aa20.93■□□□□ 0.94
SMARCD2-210ENST00000584400 TATDN3Q17R31 274 aa20.93■□□□□ 0.94
SMARCD2-210ENST00000584400 LHFPL1Q86WI0 220 aa20.93■□□□□ 0.94
SMARCD2-210ENST00000584400 AKIP1Q9NQ31 210 aa20.93■□□□□ 0.94
SMARCD2-210ENST00000584400 ANKRD34BA5PLL1 514 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 SNAPC5O75971 98 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 KRASP01116 189 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 CRYGCP07315 174 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 PSMB6P28072 239 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 TERB2Q8NHR7 220 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 ZFAND1Q8TCF1 268 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 TSC22D3Q99576 134 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 ELOVL1Q9BW60 279 aa20.92■□□□□ 0.94
SMARCD2-210ENST00000584400 E7EUB6 86 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 SAP30O75446 220 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 PRH1P02810 166 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 DEFA4P12838 97 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 HIST1H1BP16401 226 aaKnown RBP20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 ECI1P42126 302 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 OR2B8PP59922 312 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 ZNF45Q02386 682 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 ZNF585BQ52M93 769 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 HSD17B13Q7Z5P4 300 aaPredicted RBP20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 OR4C12Q96R67 309 aa20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 NXF2Q9GZY0 626 aaKnown RBP20.91■□□□□ 0.94
SMARCD2-210ENST00000584400 FABP12A6NFH5 140 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 K7EIL1 84 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 RPA2P15927 270 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 PTBP1P26599 531 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 RND3P61587 244 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 SCGB2B2Q4G0G5 96 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 DEFB121Q5J5C9 76 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 ACSM6Q6P461 480 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 QTRT1Q9BXR0 403 aaKnown RBP20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 FKBP11Q9NYL4 201 aa20.9■□□□□ 0.94
SMARCD2-210ENST00000584400 TRAV3A0A0B4J244 114 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 WI2-2373I1.2A0A1W2PRP0 233 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 DISC1C4P0D8 188 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 CYB5BO43169 146 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 OR2J3O76001 311 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 SERPINE2P07093 398 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 CTRB1P17538 263 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 G6PCP35575 357 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 DEFA5Q01523 94 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 EXOSC2Q13868 293 aaKnown RBP20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 C15orf32Q32M92 178 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 CTRB2Q6GPI1 263 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 CCDC71LQ8N9Z2 235 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 PRNDQ9UKY0 176 aa20.89■□□□□ 0.93
SMARCD2-210ENST00000584400 ZNF701M0R085 212 aaPredicted RBP20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 AKAIN1P0CW23 69 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 TRAPPC2P0DI81 140 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 TRAPPC2BP0DI82 140 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 AREGP15514 252 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 TNFSF8P32971 234 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 PIGPP57054 158 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 RPEL1Q2QD12 228 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 OR4D10Q8NGI6 311 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 OR1L8Q8NGR8 309 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 COPZ2Q9P299 210 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 FBXL7Q9UJT9 491 aa20.88■□□□□ 0.93
SMARCD2-210ENST00000584400 A0A1B0GW64 132 aa20.87■□□□□ 0.93
SMARCD2-210ENST00000584400 GSTZ1O43708 216 aaPredicted RBP20.87■□□□□ 0.93
SMARCD2-210ENST00000584400 MYOD1P15172 320 aa20.87■□□□□ 0.93
SMARCD2-210ENST00000584400 PPP5CP53041 499 aa20.87■□□□□ 0.93
SMARCD2-210ENST00000584400 OR6Q1Q8NGQ2 317 aa20.87■□□□□ 0.93
SMARCD2-210ENST00000584400 THYN1Q9P016 225 aa20.87■□□□□ 0.93
SMARCD2-210ENST00000584400 ZNF256Q9Y2P7 627 aaPredicted RBP20.87■□□□□ 0.93
SMARCD2-210ENST00000584400 RBMXL2O75526 392 aaKnown RBP20.86■□□□□ 0.93
SMARCD2-210ENST00000584400 ATG12O94817 140 aa20.86■□□□□ 0.93
SMARCD2-210ENST00000584400 S100A5P33763 92 aa20.86■□□□□ 0.93
SMARCD2-210ENST00000584400 KLF5Q13887 457 aaPredicted RBP20.86■□□□□ 0.93
SMARCD2-210ENST00000584400 H2BFWTQ7Z2G1 175 aa20.86■□□□□ 0.93
SMARCD2-210ENST00000584400 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.85■□□□□ 0.93
SMARCD2-210ENST00000584400 TEX50A0A1B0GTY4 177 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms