RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 MAP1LC3B2A6NCE7 125 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 TNFSF14O43557 240 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 CHST1O43916 411 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 NGFP01138 241 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 LINC00158P58513 81 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 WDFY1Q8IWB7 410 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 HIST1H2BAQ96A08 127 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 GUCD1Q96NT3 240 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 HDHD3Q9BSH5 251 aaPredicted RBP3.67□□□□□ -1.82
RTTN-206ENST00000581161 EMC6Q9BV81 110 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 MAP1LC3BQ9GZQ8 125 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 METRNQ9UJH8 293 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 DOCK9Q9BZ29 2069 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 IGHV1-69-2A0A0G2JMI3 117 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 COL9A1P20849 921 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 PMELP40967 661 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 POLR2GP62487 172 aaKnown RBP eCLIP3.67□□□□□ -1.82
RTTN-206ENST00000581161 IL11RAQ14626 422 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 TMEM196Q5HYL7 178 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 ACER2Q5QJU3 275 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 FAM78BQ5VT40 261 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 ARPC1AQ92747 370 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 PGLYRP4Q96LB8 373 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 C19orf24Q9BVV8 132 aa3.67□□□□□ -1.82
RTTN-206ENST00000581161 NHP2Q9NX24 153 aaKnown RBP3.67□□□□□ -1.82
RTTN-206ENST00000581161 SNRNP200O75643 2136 aaKnown RBP3.67□□□□□ -1.82
RTTN-206ENST00000581161 TMSB15BA0A087X1C1 80 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 A0A096LPE4 126 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 A0A1W2PPZ6 126 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 LILRA5A6NI73 299 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 GLI4P10075 376 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 ATP5J2P56134 94 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 RBM3P98179 157 aaKnown RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 MRPL52Q86TS9 123 aaKnown RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 RNF182Q8N6D2 247 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 C3orf56Q8N813 242 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 GATD1Q8NB37 220 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 FLVCR1-AS1Q8TAF5 88 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SLC37A2Q8TED4 501 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 NEUROG1Q92886 237 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SPSB2Q99619 263 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 KLHDC3Q9BQ90 382 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 CYTL1Q9NRR1 136 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 IL19Q9UHD0 177 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 KLF2Q9Y5W3 355 aaPredicted RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 TRAV8-2A0A0B4J237 113 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 OR11H12B2RN74 326 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 H0YIZ8 118 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SOCS1O15524 211 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 ZNF205O95201 554 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 HOXB1P14653 301 aaPredicted RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 VDAC2P45880 294 aaPredicted RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 ZNF506Q5JVG8 444 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 WFDC11Q8NEX6 87 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 OR11H1Q8NG94 326 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 OR11H2Q8NH07 326 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 ARHGAP5-AS1Q96IT6 56 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 ARRDC1-AS1Q9H2J1 176 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SDF2L1Q9HCN8 221 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 LOC400499M0QZD8 3231 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 EXPH5Q8NEV8 1989 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 HEATR5BQ9P2D3 2071 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 IGHV3-20A0A0C4DH32 117 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 A0A1W2PPI3 338 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SHISA8B8ZZ34 492 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 NDUFB1O75438 58 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 VPREB1P12018 145 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 TFF2Q03403 129 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 ABHD12Q8N2K0 398 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 THAP8Q8NA92 274 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 C8orf44Q96CB5 159 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 LOXL4Q96JB6 756 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 ZMAT4Q9H898 229 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 RNF7Q9UBF6 113 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 HSPB7Q9UBY9 170 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 A0A1W2PP11 408 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SRSF10O75494 262 aaKnown RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 HOXB4P17483 251 aaPredicted RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 KLK2P20151 261 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 CA6P23280 308 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 P2RY4P51582 365 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 GNG3P63215 75 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 UNC119Q13432 240 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 RASL11AQ6T310 242 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 GOLT1AQ6ZVE7 132 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 LYPD6Q86Y78 171 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 OR1F12Q8NHA8 337 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SPSB4Q96A44 273 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 ELSPBP1Q96BH3 223 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 RCC1LQ96I51 464 aaKnown RBP3.66□□□□□ -1.82
RTTN-206ENST00000581161 RNF122Q9H9V4 155 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 SEMA5BQ9P283 1151 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 UQCR10Q9UDW1 63 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 IGLV1-36A0A0B4J1U3 117 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 COLCA2A8K830 154 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 H0YIG0 161 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 HYPMO75409 117 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 AMBPP02760 352 aa3.66□□□□□ -1.82
RTTN-206ENST00000581161 LTBRP36941 435 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms