RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PRSS3P2Q8NHM4 247 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 OR2V2Q96R30 315 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 NABP2Q9BQ15 211 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 TMEM191AQ9H0A3 160 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 OPN3Q9H1Y3 402 aaPredicted RBP8.85□□□□□ -0.99
USB1-212ENST00000566082 APC2O95996 2303 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 K7EQM0 130 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 CELA3BP08861 270 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 TMEM11P17152 192 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 GATA2P23769 480 aaPredicted RBP8.85□□□□□ -0.99
USB1-212ENST00000566082 SCGB2A2Q13296 93 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 GGNQ86UU5 652 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 OR13A1Q8NGR1 328 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 OR2T6Q8NHC8 308 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 RNASE7Q9H1E1 156 aaKnown RBP8.85□□□□□ -0.99
USB1-212ENST00000566082 HSPB7Q9UBY9 170 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 RNF115Q9Y4L5 304 aa8.85□□□□□ -0.99
USB1-212ENST00000566082 DNAH14Q0VDD8 3507 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 NUP210Q8TEM1 1887 aaPredicted RBP8.84□□□□□ -0.99
USB1-212ENST00000566082 BMPR1BO00238 502 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 RPL30P62888 115 aaKnown RBP8.84□□□□□ -0.99
USB1-212ENST00000566082 NHLH1Q02575 133 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 MMDQ15546 238 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 ASCL4Q6XD76 172 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 HARBI1Q96MB7 349 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 GSX1Q9H4S2 264 aaPredicted RBP8.84□□□□□ -0.99
USB1-212ENST00000566082 NRN1Q9NPD7 142 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 ACTL10Q5JWF8 245 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 LINC00470Q9BZP3 86 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 SEMA5BQ9P283 1151 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 IGHV3-21A0A0B4J1V1 117 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 IFITM10A6NMD0 228 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 LINC00869P0C866 280 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 IGFBP2P18065 325 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 FOXA3P55318 350 aaPredicted RBP8.84□□□□□ -0.99
USB1-212ENST00000566082 HSPE1P61604 102 aaKnown RBP8.84□□□□□ -0.99
USB1-212ENST00000566082 TMEM14EPQ6UXP3 125 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 SSX8Q7RTT4 187 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 DMRTC2Q8IXT2 367 aaPredicted RBP8.84□□□□□ -0.99
USB1-212ENST00000566082 ST6GALNAC6Q969X2 333 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 ADTRPQ96IZ2 230 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 ZNF355PQ9NSJ1 428 aa8.84□□□□□ -0.99
USB1-212ENST00000566082 HEATR1Q9H583 2144 aaKnown RBP8.84□□□□□ -0.99
USB1-212ENST00000566082 SPEGQ15772 3267 aa8.83□□□□□ -1
USB1-212ENST00000566082 MGST3O14880 152 aa8.83□□□□□ -1
USB1-212ENST00000566082 TMPRSS2O15393 492 aa8.83□□□□□ -1
USB1-212ENST00000566082 DLEU1O43261 78 aa8.83□□□□□ -1
USB1-212ENST00000566082 KLF7O75840 302 aaPredicted RBP8.83□□□□□ -1
USB1-212ENST00000566082 IGKV1D-33P01593 117 aa8.83□□□□□ -1
USB1-212ENST00000566082 IGKV1-33P01594 117 aa8.83□□□□□ -1
USB1-212ENST00000566082 P01737 135 aa8.83□□□□□ -1
USB1-212ENST00000566082 OR5AL1P0C617 328 aa8.83□□□□□ -1
USB1-212ENST00000566082 HIST1H1EP10412 219 aaKnown RBP8.83□□□□□ -1
USB1-212ENST00000566082 LEMD1Q68G75 181 aa8.83□□□□□ -1
USB1-212ENST00000566082 ZNF497Q6ZNH5 498 aa8.83□□□□□ -1
USB1-212ENST00000566082 ZNRF1Q8ND25 227 aa8.83□□□□□ -1
USB1-212ENST00000566082 OR1L4Q8NGR5 311 aa8.83□□□□□ -1
USB1-212ENST00000566082 BCL2L2Q92843 193 aaPredicted RBP8.83□□□□□ -1
USB1-212ENST00000566082 FLYWCH2Q96CP2 140 aaKnown RBP8.83□□□□□ -1
USB1-212ENST00000566082 RBM14Q96PK6 669 aaKnown RBP8.83□□□□□ -1
USB1-212ENST00000566082 SAP30LQ9HAJ7 183 aa8.83□□□□□ -1
USB1-212ENST00000566082 NBASA2RRP1 2371 aa8.83□□□□□ -1
USB1-212ENST00000566082 CACNA1HO95180 2353 aa8.83□□□□□ -1
USB1-212ENST00000566082 LOC102723996A0A087X1L8 192 aa8.83□□□□□ -1
USB1-212ENST00000566082 PINLYPA6NC86 204 aa8.83□□□□□ -1
USB1-212ENST00000566082 SMPD2O60906 423 aa8.83□□□□□ -1
USB1-212ENST00000566082 CA2P00918 260 aa8.83□□□□□ -1
USB1-212ENST00000566082 COL8A1P27658 744 aa8.83□□□□□ -1
USB1-212ENST00000566082 KLF3P57682 345 aaPredicted RBP8.83□□□□□ -1
USB1-212ENST00000566082 PSG7Q13046 419 aa8.83□□□□□ -1
USB1-212ENST00000566082 C10orf113Q5VZT2 155 aa8.83□□□□□ -1
USB1-212ENST00000566082 INO80CQ6PI98 192 aaPredicted RBP8.83□□□□□ -1
USB1-212ENST00000566082 TMEM45BQ96B21 275 aa8.83□□□□□ -1
USB1-212ENST00000566082 PAXXQ9BUH6 204 aa8.83□□□□□ -1
USB1-212ENST00000566082 WDR83OSQ9Y284 106 aa8.83□□□□□ -1
USB1-212ENST00000566082 ISLRO14498 428 aa8.83□□□□□ -1
USB1-212ENST00000566082 FCER1GP30273 86 aa8.83□□□□□ -1
USB1-212ENST00000566082 PMCHL1Q16048 86 aa8.83□□□□□ -1
USB1-212ENST00000566082 SLC35E4Q6ICL7 350 aa8.83□□□□□ -1
USB1-212ENST00000566082 MIR17HGQ75NE6 70 aa8.83□□□□□ -1
USB1-212ENST00000566082 TMEM208Q9BTX3 173 aa8.83□□□□□ -1
USB1-212ENST00000566082 PARD6GQ9BYG4 376 aaPredicted RBP8.83□□□□□ -1
USB1-212ENST00000566082 MKRN2OSH3BPM6 223 aa8.82□□□□□ -1
USB1-212ENST00000566082 AMY1AP04745 511 aa8.82□□□□□ -1
USB1-212ENST00000566082 TIMP3P35625 211 aa8.82□□□□□ -1
USB1-212ENST00000566082 TNFAIP6P98066 277 aaPredicted RBP8.82□□□□□ -1
USB1-212ENST00000566082 ZNF585BQ52M93 769 aa8.82□□□□□ -1
USB1-212ENST00000566082 PMS2CLQ68D20 193 aa8.82□□□□□ -1
USB1-212ENST00000566082 DTX1Q86Y01 620 aa8.82□□□□□ -1
USB1-212ENST00000566082 WFDC8Q8IUA0 241 aa8.82□□□□□ -1
USB1-212ENST00000566082 FREM1Q5H8C1 2179 aa8.82□□□□□ -1
USB1-212ENST00000566082 H3BTX0 84 aa8.82□□□□□ -1
USB1-212ENST00000566082 IFNL4K9M1U5 179 aa8.82□□□□□ -1
USB1-212ENST00000566082 ETV2O00321 342 aaPredicted RBP8.82□□□□□ -1
USB1-212ENST00000566082 PSPNO60542 156 aa8.82□□□□□ -1
USB1-212ENST00000566082 RBP4P02753 201 aa8.82□□□□□ -1
USB1-212ENST00000566082 OR4A47Q6IF82 309 aa8.82□□□□□ -1
USB1-212ENST00000566082 FOXL2NBQ6ZUU3 175 aa8.82□□□□□ -1
USB1-212ENST00000566082 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms