RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SMRP1Q8NCR6 262 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 Q8TCH9 128 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 IGF2BP2-AS1Q96M15 143 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 OR4C12Q96R67 309 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 NOX3Q9HBY0 568 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 EXOSC3Q9NQT5 275 aaKnown RBP3.79□□□□□ -1.8
SMG1-207ENST00000563235 KCNIP1Q9NZI2 227 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 SOX21Q9Y651 276 aaPredicted RBP3.79□□□□□ -1.8
SMG1-207ENST00000563235 ZNF638Q14966 1978 aaKnown RBP3.79□□□□□ -1.8
SMG1-207ENST00000563235 SCN9AQ15858 1988 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 ATG2BQ96BY7 2078 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 COLCA2A8K830 154 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 HMSDA8MTL9 139 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 ZNHIT1O43257 154 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 MRPL3P09001 348 aaKnown RBP3.78□□□□□ -1.8
SMG1-207ENST00000563235 ZNF14P17017 642 aaPredicted RBP3.78□□□□□ -1.8
SMG1-207ENST00000563235 H2BFSP57053 126 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 RPS24P62847 133 aaKnown RBP3.78□□□□□ -1.8
SMG1-207ENST00000563235 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 LMX1AQ8TE12 382 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 TMEM230Q96A57 120 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 STARD4Q96DR4 205 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 TSPAN32Q96QS1 320 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 GGTLC1Q9BX51 225 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 TMEM133Q9H2Q1 129 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 WASHC3Q9Y3C0 194 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 PXMP4Q9Y6I8 212 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 NCKAP5O14513 1909 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 A6NDN8 102 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 TBL1XO60907 577 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 DYSFO75923 2080 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 PIPP12273 146 aaPredicted RBP3.78□□□□□ -1.8
SMG1-207ENST00000563235 LPAR6P43657 344 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 MTPNP58546 118 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 BEAN1Q3B7T3 259 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 FKBP1CQ5VVH2 108 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 LHFPL1Q86WI0 220 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 Q8N3U1 123 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 SLC25A40Q8TBP6 338 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 CCL17Q92583 94 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 MBD6Q96DN6 1003 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 LINC01587Q99440 93 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 LSM2Q9Y333 95 aaKnown RBP3.78□□□□□ -1.8
SMG1-207ENST00000563235 NEUROG3Q9Y4Z2 214 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 UNC80Q8N2C7 3258 aa3.78□□□□□ -1.8
SMG1-207ENST00000563235 A0A0C4DFX4 3053 aa3.78□□□□□ -1.81
SMG1-207ENST00000563235 LY6LH3BQJ8 138 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 HLA-DRB1P01911 266 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 UBE2NP61088 152 aaKnown RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 UBA52P62987 128 aaKnown RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 COL10A1Q03692 680 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 TMEM14EPQ6UXP3 125 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 LINC00114Q6XXX2 140 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 Q6ZRU5 148 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 TCF23Q7RTU1 214 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 MRGPREQ86SM8 312 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 SLC25A45Q8N413 288 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 STPG4Q8N801 248 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 VOPP1Q96AW1 172 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 PKMYT1Q99640 499 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 RHNO1Q9BSD3 238 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 LIME1Q9H400 295 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 TUBA4BQ9H853 241 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 ZNF226Q9NYT6 803 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 ZNF443Q9Y2A4 671 aaPredicted RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 MUC6Q6W4X9 2439 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 A0A1B0GV50 99 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 FFAR1O14842 300 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 GPX1P07203 203 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 CCL5P13501 91 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 GNLYP22749 145 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 PPP1CCP36873 323 aaKnown RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 ZNF146Q15072 292 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 SPANXN3Q5MJ09 141 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 ALKAL2Q6UX46 152 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 ZNF493Q6ZR52 646 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 RFLNAQ6ZTI6 216 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 FAM19A3Q7Z5A8 133 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 TRPT1Q86TN4 253 aaKnown RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 ZNF429Q86V71 674 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 NPWQ8N729 165 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 OR1L3Q8NH93 324 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 PRSS27Q9BQR3 290 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 NDUFB11Q9NX14 153 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 CCDC167Q9P0B6 97 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 ZNF629Q9UEG4 869 aaPredicted RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 C19orf25Q9UFG5 118 aaPredicted RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 PCTPQ9UKL6 214 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 TRAV19A0A0A6YYK7 116 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 MCRIP1C9JLW8 97 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 GABARAPH6UMI1 98 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 CD14P08571 375 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 SPINK8P0C7L1 97 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 EGR2P11161 476 aaPredicted RBP3.77□□□□□ -1.81
SMG1-207ENST00000563235 ERGP11308 486 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 ADCYAP1P18509 176 aa3.77□□□□□ -1.81
SMG1-207ENST00000563235 CCR2P41597 374 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms