RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 SSX8Q7RTT4 187 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 OR10D3Q8NH80 312 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 TMEM109Q9BVC6 243 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 PRELID1Q9Y255 219 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 TTC21AQ8NDW8 1320 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 TMEM94Q12767 1356 aa-0.71□□□□□ -2.52
CASC4-211ENST00000561305 CEP192Q8TEP8 1941 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 FADS1O60427 444 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 TNFAIP8O95379 198 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 APOMO95445 188 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 KRT7P08729 469 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 SLC35E2BP0CK96 405 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 XIAPP98170 497 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 PDE6HQ13956 83 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 STOML3Q8TAV4 291 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 GNPNAT1Q96EK6 184 aaPredicted RBP-0.72□□□□□ -2.52
CASC4-211ENST00000561305 SERPINB11Q96P15 392 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 MROQ9BYG7 248 aa-0.72□□□□□ -2.52
CASC4-211ENST00000561305 MUC2Q02817 5179 aa-0.72□□□□□ -2.53
CASC4-211ENST00000561305 STAB1Q9NY15 2570 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 C2orf70A6NJV1 201 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 GOLGA6L19H0YKK7 550 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 OR5F1O95221 314 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 HLA-DMBP28068 263 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 RAB4BP61018 213 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 RPS24P62847 133 aaKnown RBP-0.73□□□□□ -2.53
CASC4-211ENST00000561305 SUPT4H1P63272 117 aaKnown RBP-0.73□□□□□ -2.53
CASC4-211ENST00000561305 EBPQ15125 230 aaKnown RBP-0.73□□□□□ -2.53
CASC4-211ENST00000561305 LRRC26Q2I0M4 334 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 RBM48Q5RL73 367 aaKnown RBP-0.73□□□□□ -2.53
CASC4-211ENST00000561305 ZNF826PQ6ZT77 177 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 ZNF550Q7Z398 422 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 OR1M1Q8NGA1 313 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 PPCDCQ96CD2 204 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 PRRT1Q99946 306 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 METTL9Q9H1A3 318 aa-0.73□□□□□ -2.53
CASC4-211ENST00000561305 LRPPRCP42704 1394 aaKnown RBP-0.73□□□□□ -2.53
CASC4-211ENST00000561305 K7ERQ8 282 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 OR1I1O60431 355 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 FADS2O95864 444 aaKnown RBP-0.74□□□□□ -2.53
CASC4-211ENST00000561305 GP1BAP07359 652 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 CCL2P13500 99 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 CXCL2P19875 107 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 CD40LGP29965 261 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 ZNF80P51504 273 aaPredicted RBP-0.74□□□□□ -2.53
CASC4-211ENST00000561305 TNNC1P63316 161 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 HLA-DRB3P79483 266 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 SPINK6Q6UWN8 80 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 AAED1Q7RTV5 226 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 LRRC20Q8TCA0 184 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 ANKRD7Q92527 254 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 CELSR1Q9NYQ6 3014 aa-0.74□□□□□ -2.53
CASC4-211ENST00000561305 OTOGQ6ZRI0 2925 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 IGHV3-7P01780 117 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 ZNF25P17030 456 aaPredicted RBP-0.75□□□□□ -2.53
CASC4-211ENST00000561305 CXCL3P19876 107 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 PVALBP20472 110 aaPredicted RBP-0.75□□□□□ -2.53
CASC4-211ENST00000561305 CSN1S1P47710 185 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 CNBPP62633 177 aaKnown RBP-0.75□□□□□ -2.53
CASC4-211ENST00000561305 SMAGPQ0VAQ4 97 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 LINC00311Q8N616 119 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 OR7G1Q8NGA0 311 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 OR5B17Q8NGF7 314 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 RNASEH2CQ8TDP1 164 aaKnown RBP-0.75□□□□□ -2.53
CASC4-211ENST00000561305 ERMAPQ96PL5 475 aaPredicted RBP-0.75□□□□□ -2.53
CASC4-211ENST00000561305 NDEL1Q9GZM8 345 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 RSL24D1Q9UHA3 163 aaKnown RBP-0.75□□□□□ -2.53
CASC4-211ENST00000561305 POFUT2Q9Y2G5 429 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 A0A1W2PP64 1363 aa-0.75□□□□□ -2.53
CASC4-211ENST00000561305 TPRP12270 2363 aaKnown RBP-0.76□□□□□ -2.53
CASC4-211ENST00000561305 LINC00854A0A1B0GVQ3 168 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 DAPL1A0PJW8 107 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 C5orf49A4QMS7 147 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 CD151P48509 253 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 LCN15Q6UWW0 184 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 BLIDQ8IZY5 108 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 LINC00471Q8N535 108 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 TBC1D19Q8N5T2 526 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 OR5AK3PQ8NH89 298 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 C11orf40Q8WZ69 217 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 SLC50A1Q9BRV3 221 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 HRASLSQ9HDD0 168 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 ASCL3Q9NQ33 180 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 MAP3K19Q56UN5 1328 aa-0.76□□□□□ -2.53
CASC4-211ENST00000561305 IGF2RP11717 2491 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 AZIN1O14977 448 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 C1QAP02745 245 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 EXOC3-AS1Q8N2X6 119 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 TMEM251Q8N6I4 163 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 ANKRD36BP1Q96IX9 119 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 MED10Q9BTT4 135 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 BBS2Q9BXC9 721 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 NSRP1Q9H0G5 558 aaKnown RBP-0.77□□□□□ -2.53
CASC4-211ENST00000561305 LRP2P98164 4655 aa-0.77□□□□□ -2.53
CASC4-211ENST00000561305 RALGAPA2Q2PPJ7 1873 aa-0.78□□□□□ -2.53
CASC4-211ENST00000561305 CCDC88AQ3V6T2 1871 aa-0.78□□□□□ -2.53
CASC4-211ENST00000561305 RIMS2Q9UQ26 1411 aa-0.78□□□□□ -2.53
CASC4-211ENST00000561305 TRBV6-8A0A0A6YYG3 113 aa-0.78□□□□□ -2.53
CASC4-211ENST00000561305 TEX50A0A1B0GTY4 177 aa-0.78□□□□□ -2.53
CASC4-211ENST00000561305 KRT75O95678 551 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms