RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 IGHV3OR15-7A0A075B7D8 119 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 TRAV5A0A0B4J249 113 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 TRAV38-1A0A0B4J264 116 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 IGKV1-6A0A0C4DH72 117 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 IGHV3-64DA0A0J9YX35 117 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 A0A1B0GVX0 72 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 FAM168BA1KXE4 195 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 GGT3PA6NGU5 568 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SIGLEC16A6NMB1 481 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SRRM5B3KS81 715 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 K7ERU9 68 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 LST1O00453 97 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SOCS1O15524 211 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 NDUFA2O43678 99 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SLC25A20O43772 301 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 GGCTO75223 188 aaKnown RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 DPM2O94777 84 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 CDS2O95674 445 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 LY6G6DO95868 133 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 IGHV1-46P01743 117 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 OR5AC1P0C628 307 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 BCL2P10415 239 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SLC25A16P16260 332 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 NFYBP25208 207 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 S100PP25815 95 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 MPV17P39210 176 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 GABRA2P47869 451 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 CMC4P56277 68 aaPredicted RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 WNT4P56705 351 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 FXYD7P58549 80 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 LINC00313P59037 77 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 FKBP1AP62942 108 aaKnown RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 MRPS10P82664 201 aaKnown RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 LOXL1Q08397 574 aaPredicted RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 OR8B8Q15620 311 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 LTC4SQ16873 150 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 LGALSLQ3ZCW2 172 aaPredicted RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 SPANXN3Q5MJ09 141 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 C9orf129Q5T035 196 aaKnown RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 ZNF767PQ75MW2 155 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 TCTE3Q8IZS6 198 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 C10orf126Q8N4M7 172 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 DAND5Q8N907 189 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 TMEM229BQ8NBD8 167 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 NUP35Q8NFH5 326 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 OR11G2Q8NGC1 345 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 OR13C4Q8NGS5 318 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 LINC01006Q8NI28 216 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 BORCS8Q96FH0 119 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 C1orf147Q96MC9 270 aaPredicted RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 ERMAPQ96PL5 475 aaPredicted RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 YPEL2Q96QA6 119 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 LXNQ9BS40 222 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 SMIM3Q9BZL3 60 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 GOLGA2P5Q9HBQ8 144 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 ZNF286AQ9HBT8 521 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 ZNF355PQ9NSJ1 428 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 GNG8Q9UK08 70 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 PCTPQ9UKL6 214 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 TRAPPC2LQ9UL33 140 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 MRPS16Q9Y3D3 137 aaKnown RBP1.44□□□□□ -2.18
RTF1-207ENST00000561076 PHLDA3Q9Y5J5 127 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 DISP1Q96F81 1524 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 ARHGEF12Q9NZN5 1544 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 VWA8A3KMH1 1905 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 ABCC12Q96J65 1359 aa1.44□□□□□ -2.18
RTF1-207ENST00000561076 ATP10BO94823 1461 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 COL3A1P02461 1466 aaPredicted RBP1.43□□□□□ -2.18
RTF1-207ENST00000561076 TCOF1Q13428 1488 aaKnown RBP1.43□□□□□ -2.18
RTF1-207ENST00000561076 CDK12Q9NYV4 1490 aaPredicted RBP1.43□□□□□ -2.18
RTF1-207ENST00000561076 IQGAP2Q13576 1575 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 DYSFO75923 2080 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 IGHV3-43A0A0B4J1X8 118 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 TRAV4A0A0B4J268 109 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 A0A1B0GX51 115 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 A0A1W2PPR1 153 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 IRGMA1A4Y4 181 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 IZUMO1RA6ND01 250 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 ZNF98A6NK75 572 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 A8MUN3 132 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 IGLL5B9A064 214 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 C9JCJ5 164 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 F8W036 122 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 UBFD1O14562 309 aaKnown RBP1.43□□□□□ -2.18
RTF1-207ENST00000561076 PLA2G10O15496 165 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 CREBL2O60519 120 aaPredicted RBP1.43□□□□□ -2.18
RTF1-207ENST00000561076 SH2D1AO60880 128 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 LYZL6O75951 148 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 CST7O76096 145 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 OR2H2O95918 312 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 PRM2P04554 102 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 CSN2P05814 226 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 UCHL1P09936 223 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 TSPAN19P0C672 248 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 LINC00869P0C866 280 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 TLX1NBP0CAT3 122 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 ZNF286BP0CG31 522 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 LGALS3P17931 250 aaKnown RBP1.43□□□□□ -2.18
RTF1-207ENST00000561076 GZMHP20718 246 aa1.43□□□□□ -2.18
RTF1-207ENST00000561076 NPY1RP25929 384 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms