RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 OR2C3Q8N628 320 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 DTD1Q8TEA8 209 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 EAF1Q96JC9 268 aaPredicted RBP6.91□□□□□ -1.3
TRAF3-209ENST00000560463 QTRT1Q9BXR0 403 aaKnown RBP6.91□□□□□ -1.3
TRAF3-209ENST00000560463 GON7Q9BXV9 100 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 COMMD5Q9GZQ3 224 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 ARL6Q9H0F7 186 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 HIPK2Q9H2X6 1198 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 PSENENQ9NZ42 101 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 C1RLQ9NZP8 487 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 KIAA1456Q9P272 454 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 ITGB1BP2Q9UKP3 347 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 NUP50Q9UKX7 468 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 SIGLEC9Q9Y336 463 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 FAM96BQ9Y3D0 163 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 OR51B2Q9Y5P1 312 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 ACANP16112 2415 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 TRAV3A0A0B4J244 114 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 TEX50A0A1B0GTY4 177 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 KANTRA0A1W2PQU2 76 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 CEBPZOSA8MTT3 80 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 INS-IGF2F8WCM5 200 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 SLC25A17O43808 307 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 NXPH3O95157 252 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 AVPP01185 164 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 FSHBP01225 129 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 CRYGBP07316 175 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 SNRNP70P08621 437 aaKnown RBP6.9□□□□□ -1.3
TRAF3-209ENST00000560463 AP2S1P53680 142 aaPredicted RBP6.9□□□□□ -1.3
TRAF3-209ENST00000560463 PAX9P55771 341 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 ATP5IP56385 69 aaPredicted RBP6.9□□□□□ -1.3
TRAF3-209ENST00000560463 OR2B8PP59922 312 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 PRCDQ00LT1 54 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 BAXQ07812 192 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 OPCMLQ14982 345 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 KLF17Q5JT82 389 aaPredicted RBP6.9□□□□□ -1.3
TRAF3-209ENST00000560463 PPP1R27Q86WC6 154 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 STX12Q86Y82 276 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 MRPL41Q8IXM3 137 aaKnown RBP6.9□□□□□ -1.3
TRAF3-209ENST00000560463 Q8N6K4 173 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 OR1L8Q8NGR8 309 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 NANPQ8TBE9 248 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 C17orf50Q8WW18 174 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 RITA1Q96K30 269 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 SLA2Q9H6Q3 261 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 ZNF430Q9H8G1 570 aaPredicted RBP6.9□□□□□ -1.3
TRAF3-209ENST00000560463 ENY2Q9NPA8 101 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 HEYLQ9NQ87 328 aaPredicted RBP6.9□□□□□ -1.3
TRAF3-209ENST00000560463 ZC4H2Q9NQZ6 224 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 PLSCR3Q9NRY6 295 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 TCF19Q9Y242 345 aa6.9□□□□□ -1.3
TRAF3-209ENST00000560463 BAHCC1Q9P281 2608 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 A0A0U1RQK1 487 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 A0A1W2PN81 502 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 RRHO14718 337 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 BCL2L11O43521 198 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 ACTL6BO94805 426 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 TMEM50AO95807 157 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 TMEM11P17152 192 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 CNTFRP26992 372 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 CHRNA7P36544 502 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 CAV2P51636 162 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 F2RL1P55085 397 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 PLGLAQ15195 96 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 MMDQ15546 238 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 PRSS8Q16651 343 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 RUSC1-AS1Q66K80 236 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 BRD3OSQ6XYD6 125 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 C9orf139Q6ZV77 190 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 HSD17B13Q7Z5P4 300 aaPredicted RBP6.89□□□□□ -1.31
TRAF3-209ENST00000560463 SLC51BQ86UW2 128 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 TMEM252Q8N6L7 170 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 ARPC5LQ9BPX5 153 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 NDUFA4L2Q9NRX3 87 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 METTL1Q9UBP6 276 aaKnown RBP6.89□□□□□ -1.31
TRAF3-209ENST00000560463 PITPNC1Q9UKF7 332 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 STRAPQ9Y3F4 350 aaKnown RBP6.89□□□□□ -1.31
TRAF3-209ENST00000560463 U3KQ87 197 aa6.89□□□□□ -1.31
TRAF3-209ENST00000560463 IGHV3OR16-10A0A075B7F0 116 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 FAM24AA6NFZ4 105 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 MSGN1A6NI15 193 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 CD5LO43866 347 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 IAPPP10997 89 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 VDAC2P45880 294 aaPredicted RBP6.88□□□□□ -1.31
TRAF3-209ENST00000560463 HOXA1P49639 335 aaPredicted RBP6.88□□□□□ -1.31
TRAF3-209ENST00000560463 SULT1A1P50225 295 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 RAB11AP62491 216 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 EIF5AP63241 154 aaKnown RBP6.88□□□□□ -1.31
TRAF3-209ENST00000560463 HBG1P69891 147 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 HBG2P69892 147 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 EWSR1Q01844 656 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAF3-209ENST00000560463 NHLH2Q02577 135 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 C5orf64Q2M2E5 130 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 MRGPRG-AS1Q2M3A8 158 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 LRRC75BQ2VPJ9 315 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 SPANXN5Q5MJ07 72 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
TRAF3-209ENST00000560463 CIARTQ8N365 385 aaPredicted RBP6.88□□□□□ -1.31
TRAF3-209ENST00000560463 STPG2Q8N412 459 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms