RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 CYC1P08574 325 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 PRAMEF5Q5TYX0 476 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 PRAMEF6Q5VXH4 476 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 SHISA2Q6UWI4 295 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 MRAP2Q96G30 205 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 CLCF1Q9UBD9 225 aa16.03■□□□□ 0.16
SEMA4B-215ENST00000560089 ZNF207O43670 478 aaKnown RBP16.02■□□□□ 0.16
SEMA4B-215ENST00000560089 SLC25A17O43808 307 aa16.02■□□□□ 0.16
SEMA4B-215ENST00000560089 SAP25Q8TEE9 199 aa16.02■□□□□ 0.16
SEMA4B-215ENST00000560089 LSM10Q969L4 123 aaKnown RBP16.02■□□□□ 0.16
SEMA4B-215ENST00000560089 TXNDC17Q9BRA2 123 aa16.02■□□□□ 0.16
SEMA4B-215ENST00000560089 IGKV1-27A0A075B6S5 117 aa16.02■□□□□ 0.15
SEMA4B-215ENST00000560089 A0A1W2PPV4 95 aa16.02■□□□□ 0.15
SEMA4B-215ENST00000560089 ARL4DP49703 201 aa16.02■□□□□ 0.15
SEMA4B-215ENST00000560089 TMEM97Q5BJF2 176 aa16.02■□□□□ 0.15
SEMA4B-215ENST00000560089 CARD17Q5XLA6 110 aa16.02■□□□□ 0.15
SEMA4B-215ENST00000560089 SPCS1Q9Y6A9 102 aa16.02■□□□□ 0.15
SEMA4B-215ENST00000560089 ASCC3Q8N3C0 2202 aaKnown RBP16.02■□□□□ 0.15
SEMA4B-215ENST00000560089 A0A0G2JLM5 398 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 OR7C1O76099 320 aaPredicted RBP16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 FTH1P19P0C7X4 201 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 HIST1H1EP10412 219 aaKnown RBP16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 GCSAMLQ5JQS6 135 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 BLNKQ8WV28 456 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 MMABQ96EY8 250 aaPredicted RBP16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 NPIPB13A6NJU9 1138 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 TMEM150CB9EJG8 249 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 NPIPB4C9JG80 1138 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 RPL31P62899 125 aaKnown RBP16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 IGLV3-21P80748 117 aaPredicted RBP16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 CEACAM21Q3KPI0 293 aa16.01■□□□□ 0.15
SEMA4B-215ENST00000560089 LIPT2A6NK58 231 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 DUX1O43812 170 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 MGST1P10620 155 aaKnown RBP16■□□□□ 0.15
SEMA4B-215ENST00000560089 TNFRSF19Q9NS68 423 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 C19orf25Q9UFG5 118 aaPredicted RBP16■□□□□ 0.15
SEMA4B-215ENST00000560089 ZNF835Q9Y2P0 537 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 IGKV1-12A0A0C4DH73 117 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 IGKV1-39P01597 117 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 IGKV1D-12P01611 117 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 IGKV1D-39P04432 117 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 VSTM2AQ8TAG5 236 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 OR2D2Q9H210 308 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 TECRQ9NZ01 308 aaKnown RBP16■□□□□ 0.15
SEMA4B-215ENST00000560089 R4GN57 208 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 TNRC6BQ9UPQ9 1833 aaKnown RBP16■□□□□ 0.15
SEMA4B-215ENST00000560089 LY6G6EA0A0G2JKS1 128 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 A6NDN8 102 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 TUSC2O75896 110 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 AGFG2O95081 481 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 IGKV1-5P01602 117 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 REG1BP48304 166 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 RPS16P62249 146 aaKnown RBP16■□□□□ 0.15
SEMA4B-215ENST00000560089 FXYD3Q14802 87 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 TMEM191AQ9H0A3 160 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 U3KQA8 63 aa16■□□□□ 0.15
SEMA4B-215ENST00000560089 ADH4P08319 380 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 BPIFA4PQ86YQ2 179 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 BORCS8Q96FH0 119 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 FER1L6-AS2Q96M78 137 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 CACNA1HO95180 2353 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 SP9P0CG40 484 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 ARL14EPLP0DKL9 152 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 LTC4SQ16873 150 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 C10orf35Q96D05 121 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 ARRDC1-AS1Q9H2J1 176 aa15.99■□□□□ 0.15
SEMA4B-215ENST00000560089 SYS1-DBNDD2H3BUS1 97 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 TMEM249Q2WGJ8 235 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 A0A1W2PQM1 296 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 C9JCJ5 164 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 CRXO43186 299 aaPredicted RBP15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 CLDN14O95500 239 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 CCL7P80098 99 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 PLXDC1Q8IUK5 500 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 SPACA3Q8IXA5 215 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 TMEM251Q8N6I4 163 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 STPG3Q8N7X2 389 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 OR1L3Q8NH93 324 aa15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 RNASE7Q9H1E1 156 aaKnown RBP15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 ZNF331Q9NQX6 463 aaPredicted RBP15.98■□□□□ 0.15
SEMA4B-215ENST00000560089 SNAI2O43623 268 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 C2orf91Q6ZV80 131 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 RAB1CQ92928 201 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 SAP30LQ9HAJ7 183 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 PGPEP1Q9NXJ5 209 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 LY96Q9Y6Y9 160 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 FOXE3Q13461 319 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 KCNIP1Q9NZI2 227 aa15.97■□□□□ 0.15
SEMA4B-215ENST00000560089 FRG2CA6NGY1 282 aa15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 SLC23A3Q6PIS1 610 aa15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 RAB37Q96AX2 223 aa15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 C1RLQ9NZP8 487 aa15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 YTHDF2Q9Y5A9 579 aaKnown RBP15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 ANKRD30BLA7E2S9 258 aa15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 RBMXL2O75526 392 aaKnown RBP15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 EDDM3BP56851 147 aa15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 RBM11P57052 281 aaKnown RBP15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 TMEM177Q53S58 311 aa15.96■□□□□ 0.15
SEMA4B-215ENST00000560089 SHISA6Q6ZSJ9 500 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms