RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ADAD2Q8NCV1 583 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 MCFD2Q8NI22 146 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 TMEM167AQ8TBQ9 72 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 ZFAND1Q8TCF1 268 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 ISOC1Q96CN7 298 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 ZNF486Q96H40 463 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 FYTTD1Q96QD9 318 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 OR4C12Q96R67 309 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 ABHD1Q96SE0 405 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 GPHA2Q96T91 129 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 SRSF8Q9BRL6 282 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 ELOVL1Q9BW60 279 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 QTRT1Q9BXR0 403 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 TINAGL1Q9GZM7 467 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 ALX4Q9H161 411 aaPredicted RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 GNB4Q9HAV0 340 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 SLC2A9Q9NRM0 540 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 TMEM140Q9NV12 185 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 PEF1Q9UBV8 284 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 KLK11Q9UBX7 282 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 MTFP1Q9UDX5 166 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 RSL24D1Q9UHA3 163 aaKnown RBP3.39□□□□□ -1.87
SNX1-205ENST00000559339 ZNF257Q9Y2Q1 563 aa3.39□□□□□ -1.87
SNX1-205ENST00000559339 IGHV4OR15-8A0A075B7B6 117 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 A0A087WW49 117 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 TRBV7-1A0A0A6YYK4 115 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PIGBOS1A0A0B4J2F0 54 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 ANKRD34BA5PLL1 514 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 FABP12A6NFH5 140 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 NPIPB5A8MRT5 1133 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 DISC1C4P0D8 188 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 H3BMQ9 156 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 M0QYG6 137 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 ZNF701M0R085 212 aaPredicted RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 CTDSPLO15194 276 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 B3GALNT1O75752 331 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 S1PR2O95136 353 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 RAB3DO95716 219 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 ZNF735P0CB33 412 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 AKAIN1P0CW23 69 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 RPA2P15927 270 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PSMB6P28072 239 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 FAUP35544 74 aaKnown RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 LPAR6P43657 344 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 SLURP1P55000 103 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PIGPP57054 158 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 BRWD1-AS2P59051 145 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 AP3S2P59780 193 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 SSBP2P81877 361 aaPredicted RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 RHOGP84095 191 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 SURF2Q15527 256 aaPredicted RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 POU2AF1Q16633 256 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 C15orf32Q32M92 178 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PHLDA2Q53GA4 152 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 C10orf55Q5SWW7 151 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 ASPHD1Q5U4P2 390 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 STEAP1BQ6NZ63 245 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 ZNF343Q6P1L6 599 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 H2BFWTQ7Z2G1 175 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 TBC1D26Q86UD7 250 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 LAX1Q8IWV1 398 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 CADM3Q8N126 398 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 CCDC71LQ8N9Z2 235 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 TMEM229BQ8NBD8 167 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 OR6Q1Q8NGQ2 317 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 OR1L8Q8NGR8 309 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 OR5B3Q8NH48 314 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 OR52I2Q8NH67 350 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 TERB2Q8NHR7 220 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 DYNC2LI1Q8TCX1 351 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 SMIM4Q8WVI0 70 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 DCUN1D4Q92564 292 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 DLX4Q92988 240 aaPredicted RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 EEF1AKMT3Q96AZ1 226 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 CXorf58Q96LI9 332 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 TMEM56Q96MV1 263 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PRRT1Q99946 306 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PDCD10Q9BUL8 212 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 RSRP1Q9BUV0 290 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 SLIRPQ9GZT3 109 aaKnown RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 FAM212BQ9NTI7 297 aaPredicted RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 AURKAIP1Q9NWT8 199 aaPredicted RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 COPZ2Q9P299 210 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 SCP2D1Q9UJQ7 156 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 FBXL7Q9UJT9 491 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 PRNDQ9UKY0 176 aa3.38□□□□□ -1.87
SNX1-205ENST00000559339 C14orf166Q9Y224 244 aaKnown RBP3.38□□□□□ -1.87
SNX1-205ENST00000559339 PLXNB1O43157 2135 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 TRBV9A0A0B4J1U6 114 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 TEX13DA0A0J9YY54 714 aaPredicted RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 C3orf85A0A1B0GTC6 90 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 HMX3A6NHT5 357 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 TEX22C9J3V5 150 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 H0Y980 276 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 UPK2O00526 184 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 GGCTO75223 188 aaKnown RBP3.37□□□□□ -1.87
SNX1-205ENST00000559339 OR2J3O76001 311 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 LY86O95711 162 aa3.37□□□□□ -1.87
SNX1-205ENST00000559339 PRH1P02810 166 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms