RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 RSRP1Q9BUV0 290 aa13.44□□□□□ -0.26
SMAD3-210ENST00000559092 MRPS26Q9BYN8 205 aaKnown RBP13.44□□□□□ -0.26
SMAD3-210ENST00000559092 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
SMAD3-210ENST00000559092 PEMTQ9UBM1 199 aa13.44□□□□□ -0.26
SMAD3-210ENST00000559092 TENM3Q9P273 2699 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 BMPR1BO00238 502 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 OR2J3O76001 311 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 AREGP15514 252 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 S100GP29377 79 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 OR2B8PP59922 312 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 TSPAN5P62079 268 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 GPR107Q5VW38 600 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 DMBX1Q8NFW5 382 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 DGCR14Q96DF8 476 aaKnown RBP13.43□□□□□ -0.26
SMAD3-210ENST00000559092 FANCD2OSQ96PS1 177 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 NAA50Q9GZZ1 169 aaKnown RBP13.43□□□□□ -0.26
SMAD3-210ENST00000559092 FAM212BQ9NTI7 297 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-210ENST00000559092 TMEM140Q9NV12 185 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 FBXL7Q9UJT9 491 aa13.43□□□□□ -0.26
SMAD3-210ENST00000559092 SORL1Q92673 2214 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 S1PR2O95136 353 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 RLN1P04808 185 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 CSN3P07498 182 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 ERVK-16P61578 105 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
SMAD3-210ENST00000559092 C15orf40Q8WUR7 153 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 WWC2-AS2Q96NR7 200 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 U3KQK5 164 aa13.42□□□□□ -0.26
SMAD3-210ENST00000559092 CGB1A6NKQ9 187 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 MARCH11A6NNE9 402 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 FAM25AB3EWG3 89 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 FAM25CB3EWG5 89 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 FAM25GB3EWG6 89 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 GGCTO75223 188 aaKnown RBP13.41□□□□□ -0.26
SMAD3-210ENST00000559092 DEFA4P12838 97 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 ALDH3B2P48448 385 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 UCP3P55916 312 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 HSD17B13Q7Z5P4 300 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-210ENST00000559092 GPR141Q7Z602 305 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 QTRT1Q9BXR0 403 aaKnown RBP13.41□□□□□ -0.26
SMAD3-210ENST00000559092 FXYD6Q9H0Q3 95 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 DMRT1Q9Y5R6 373 aa13.41□□□□□ -0.26
SMAD3-210ENST00000559092 TRAV3A0A0B4J244 114 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 CYB5BO43169 146 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 NDUFB8O95169 186 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 MYOD1P15172 320 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 LPAR6P43657 344 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 MECP2P51608 486 aaKnown RBP13.4□□□□□ -0.26
SMAD3-210ENST00000559092 ZNF585BQ52M93 769 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 SLC38A6Q8IZM9 456 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 OR2K2Q8NGT1 345 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 FCAMRQ8WWV6 532 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 EEF1AKMT3Q96AZ1 226 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 CXorf58Q96LI9 332 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 ASCL2Q99929 193 aa13.4□□□□□ -0.26
SMAD3-210ENST00000559092 IGLV11-55A0A075B6I3 123 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 TRBV7-1A0A0A6YYK4 115 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 IGLC7A0M8Q6 106 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 LGALS9O00182 355 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 KRASP01116 189 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 TRAPPC2P0DI81 140 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 TRAPPC2BP0DI82 140 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 TBPP20226 339 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 LCN12Q6JVE5 192 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 C19orf35Q6ZS72 473 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 GPHB5Q86YW7 130 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 Q8N1Y9 231 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 Q8N402 240 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 OR1L8Q8NGR8 309 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 FKBP11Q9NYL4 201 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 THYN1Q9P016 225 aa13.39□□□□□ -0.27
SMAD3-210ENST00000559092 A8MZ25 164 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 SNAPC5O75971 98 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 IFNA6P05013 189 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 FRMD6-AS1P0C7T7 363 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 PHLDA2Q53GA4 152 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 NDUFA4L2Q9NRX3 87 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 EXTL2Q9UBQ6 330 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 KLK11Q9UBX7 282 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 MTFP1Q9UDX5 166 aa13.38□□□□□ -0.27
SMAD3-210ENST00000559092 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 PPP5D1E7EU14 171 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 REG1AP05451 166 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 RPA2P15927 270 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 PTBP1P26599 531 aaKnown RBP eCLIP13.37□□□□□ -0.271e-8■■■■□ 20.9
SMAD3-210ENST00000559092 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 SGPP2Q8IWX5 399 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 ARRDC1Q8N5I2 433 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 CCDC140Q96MF4 163 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 ABHD1Q96SE0 405 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 PRNDQ9UKY0 176 aa13.37□□□□□ -0.27
SMAD3-210ENST00000559092 OR2C1O95371 312 aa13.36□□□□□ -0.27
SMAD3-210ENST00000559092 CLEC3BP05452 202 aa13.36□□□□□ -0.27
SMAD3-210ENST00000559092 SERPINE2P07093 398 aa13.36□□□□□ -0.27
SMAD3-210ENST00000559092 G6PCP35575 357 aa13.36□□□□□ -0.27
SMAD3-210ENST00000559092 ARL3P36405 182 aa13.36□□□□□ -0.27
SMAD3-210ENST00000559092 FAM106AQ4KMX7 169 aa13.36□□□□□ -0.27
SMAD3-210ENST00000559092 RNASE10Q5GAN6 216 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms