RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TXNDC9O14530 226 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 ACOX3O15254 700 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 KRT75O95678 551 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 KRT7P08729 469 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 UCHL1P09936 223 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 CCR2P41597 374 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 MAP2K4P45985 399 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 HINT1P49773 126 aaPredicted RBP1.96□□□□□ -2.1
SYNE2-210ENST00000553455 MAGOHP61326 146 aaKnown RBP1.96□□□□□ -2.1
SYNE2-210ENST00000553455 NAA20P61599 178 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 EMX1Q04741 257 aaPredicted RBP1.96□□□□□ -2.1
SYNE2-210ENST00000553455 TNFAIP8L3Q5GJ75 292 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 PABPC1L2AQ5JQF8 200 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 OR5J2Q8NH18 312 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 DCANP1Q8TF63 244 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 PARD6GQ9BYG4 376 aaPredicted RBP1.96□□□□□ -2.1
SYNE2-210ENST00000553455 OR51I1Q9H343 314 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 PARVGQ9HBI0 331 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 RBM7Q9Y580 266 aaKnown RBP1.96□□□□□ -2.1
SYNE2-210ENST00000553455 ABCC5O15440 1437 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 PLXNC1O60486 1568 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 PCF11O94913 1555 aaKnown RBP1.96□□□□□ -2.1
SYNE2-210ENST00000553455 SUPT6HQ7KZ85 1726 aaKnown RBP1.96□□□□□ -2.1
SYNE2-210ENST00000553455 ITSN2Q9NZM3 1697 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 SIPA1L1O43166 1804 aa1.96□□□□□ -2.1
SYNE2-210ENST00000553455 PXDNLA1KZ92 1463 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 ADGRL2O95490 1459 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 A2MP01023 1474 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 SHANK2Q9UPX8 1470 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 EVC2Q86UK5 1308 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 HECW2Q9P2P5 1572 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 INO80Q9ULG1 1556 aaPredicted RBP1.95□□□□□ -2.1
SYNE2-210ENST00000553455 DIP2CQ9Y2E4 1556 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 FGD6Q6ZV73 1430 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 RRBP1Q9P2E9 1410 aaKnown RBP1.95□□□□□ -2.1
SYNE2-210ENST00000553455 A0A1B0GW54 56 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 OR4C45A6NMZ5 311 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 LST1O00453 97 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 MYL12AP19105 171 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 SLCO1A2P46721 670 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 FXYD7P58549 80 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 TAS2R20P59543 309 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 MIAQ16674 131 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 ZNF791Q3KP31 576 aaPredicted RBP1.95□□□□□ -2.1
SYNE2-210ENST00000553455 Q6ZTI0 123 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 DIRAS2Q96HU8 199 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 TIMM21Q9BVV7 248 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 GPR84Q9NQS5 396 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 HHLA3Q9XRX5 114 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 PRELID1Q9Y255 219 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 MROH2AA6NES4 1674 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 ADGBQ8N7X0 1667 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 SORL1Q92673 2214 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 ARHGAP5Q13017 1502 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 ZFYVE16Q7Z3T8 1539 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 LMTK2Q8IWU2 1503 aa1.95□□□□□ -2.1
SYNE2-210ENST00000553455 MDC1Q14676 2089 aaKnown RBP1.95□□□□□ -2.1
SYNE2-210ENST00000553455 MED14O60244 1454 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 CCDC141Q6ZP82 1450 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 WDR90Q96KV7 1748 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 ITGB4P16144 1822 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 ERBINQ96RT1 1412 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 TRAV41A0A0B4J266 112 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 RFPL4AA6NLU0 287 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 A8MUN3 132 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 RFPL4AL1F8VTS6 287 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 PLA2G10O15496 165 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 CCR7P32248 378 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 AP2S1P53680 142 aaPredicted RBP1.94□□□□□ -2.1
SYNE2-210ENST00000553455 TCL1AP56279 114 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 UBE2IP63279 158 aaKnown RBP1.94□□□□□ -2.1
SYNE2-210ENST00000553455 C5orf46Q6UWT4 87 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 SLC35E3Q7Z769 313 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 SLC22A24Q8N4F4 322 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 DEFB125Q8N687 156 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 OR51T1Q8NGJ9 327 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 SPACA4Q8TDM5 124 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 ASB17Q8WXJ9 295 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 FKBP14Q9NWM8 211 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 AMMECR1Q9Y4X0 333 aaPredicted RBP1.94□□□□□ -2.1
SYNE2-210ENST00000553455 ATP7AQ04656 1500 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 DUOX2Q9NRD8 1548 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 ADCY9O60503 1353 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 KIAA2026Q5HYC2 2103 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 RNF17Q9BXT8 1623 aaKnown RBP1.94□□□□□ -2.1
SYNE2-210ENST00000553455 ANKRD30AQ9BXX3 1397 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 EIF2AK4Q9P2K8 1649 aaKnown RBP1.94□□□□□ -2.1
SYNE2-210ENST00000553455 CAMSAP2Q08AD1 1489 aa1.94□□□□□ -2.1
SYNE2-210ENST00000553455 KDM5AP29375 1690 aaKnown RBP1.93□□□□□ -2.1
SYNE2-210ENST00000553455 DAPK1P53355 1430 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 SYCP2Q9BX26 1530 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 DEPDC5O75140 1603 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 ABCA6Q8N139 1617 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 TMSB15BA0A087X1C1 80 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 IGHV1-69-2A0A0G2JMI3 117 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 J3QQQ9 107 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 IFNA5P01569 189 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 CCL5P13501 91 aa1.93□□□□□ -2.1
SYNE2-210ENST00000553455 MARCKSL1P49006 195 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms