RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 S100A16Q96FQ6 103 aaKnown RBP10.87□□□□□ -0.67
COL2A1-209ENST00000546974 HRASLSQ9HDD0 168 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 SLC2A8Q9NY64 477 aa10.87□□□□□ -0.67
COL2A1-209ENST00000546974 TECRQ9NZ01 308 aaKnown RBP10.87□□□□□ -0.67
COL2A1-209ENST00000546974 PLECQ15149 4684 aaKnown RBP10.87□□□□□ -0.67
COL2A1-209ENST00000546974 CGB1A6NKQ9 187 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 HLA-AP01891 365 aaKnown RBP10.86□□□□□ -0.67
COL2A1-209ENST00000546974 IFNA6P05013 189 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 FCER2P06734 321 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 FGF2P09038 288 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 DEFA4P12838 97 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 MYOD1P15172 320 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 ARL3P36405 182 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 CD81P60033 236 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 CLEC19AQ6UXS0 136 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 LINC00322Q6ZN03 302 aaPredicted RBP10.86□□□□□ -0.67
COL2A1-209ENST00000546974 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 CD300LFQ8TDQ1 290 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 BORCS5Q969J3 196 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 CCDC140Q96MF4 163 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 NEURL2Q9BR09 285 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 SRSF8Q9BRL6 282 aaKnown RBP10.86□□□□□ -0.67
COL2A1-209ENST00000546974 ZC4H2Q9NQZ6 224 aa10.86□□□□□ -0.67
COL2A1-209ENST00000546974 IGLV11-55A0A075B6I3 123 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 TRBV7-1A0A0A6YYK4 115 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 MEIS3P1A6NDR6 274 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 UPK2O00526 184 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 TPPPO94811 219 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 IGHV3-23P01764 117 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 REG1AP05451 166 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 OR2B8PP59922 312 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 HERV-K104P61576 105 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 FAM106AQ4KMX7 169 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 UBE2NLQ5JXB2 153 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 DHRS11Q6UWP2 260 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 CXorf58Q96LI9 332 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 PLEKHA2Q9HB19 425 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 IFT46Q9NQC8 304 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 CEPT1Q9Y6K0 416 aa10.85□□□□□ -0.67
COL2A1-209ENST00000546974 HYDINQ4G0P3 5121 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 TRAV3A0A0B4J244 114 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 CD7P09564 240 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 EDN2P20800 178 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 CBLN1P23435 193 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 GNRHRP30968 328 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 TGFBR1P36897 503 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 RPS19P39019 145 aaKnown RBP10.84□□□□□ -0.67
COL2A1-209ENST00000546974 AADACL3Q5VUY0 350 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 TMEM17Q86X19 198 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 OR51H1Q8NH63 302 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 COMMD5Q9GZQ3 224 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 TMEM140Q9NV12 185 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 EHFQ9NZC4 300 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 COMMD9Q9P000 198 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 ANAPC10Q9UM13 185 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 S4R3C0 116 aa10.84□□□□□ -0.67
COL2A1-209ENST00000546974 IGLC7A0M8Q6 106 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 A8MWP6 167 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 S1PR2O95136 353 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 CLEC3BP05452 202 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 NAT1P18440 290 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 RFX2P48378 723 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 GUCA2BQ16661 112 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 TMEM69Q5SWH9 247 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 ZFAND6Q6FIF0 208 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 THOC7Q6I9Y2 204 aaKnown RBP10.83□□□□□ -0.68
COL2A1-209ENST00000546974 DEFB125Q8N687 156 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 DMBX1Q8NFW5 382 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 YIPF6Q96EC8 236 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 QTRT1Q9BXR0 403 aaKnown RBP10.83□□□□□ -0.68
COL2A1-209ENST00000546974 HIPK2Q9H2X6 1198 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 THYN1Q9P016 225 aa10.83□□□□□ -0.68
COL2A1-209ENST00000546974 A0A087WXM4 84 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 ZNF320A2RRD8 509 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 TMEM213A2RRL7 107 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 MFSD2BA6NFX1 497 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 TAS2R46P59540 309 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 TAS2R20P59543 309 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 ZNF57Q68EA5 555 aaPredicted RBP10.82□□□□□ -0.68
COL2A1-209ENST00000546974 CADM3Q8N126 398 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 SAMD12Q8N8I0 201 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 CACNG8Q8WXS5 425 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 MOB3AQ96BX8 217 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 WDR89Q96FK6 387 aaPredicted RBP10.82□□□□□ -0.68
COL2A1-209ENST00000546974 ZNF2Q9BSG1 426 aaPredicted RBP10.82□□□□□ -0.68
COL2A1-209ENST00000546974 SRD5A3Q9H8P0 318 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 VCX3AQ9NNX9 186 aa10.82□□□□□ -0.68
COL2A1-209ENST00000546974 RBMY1BA6NDE4 496 aaKnown RBP10.81□□□□□ -0.68
COL2A1-209ENST00000546974 RBMY1EA6NEQ0 496 aaKnown RBP10.81□□□□□ -0.68
COL2A1-209ENST00000546974 CYB5BO43169 146 aa10.81□□□□□ -0.68
COL2A1-209ENST00000546974 PGLYRP1O75594 196 aaPredicted RBP10.81□□□□□ -0.68
COL2A1-209ENST00000546974 PMP2P02689 132 aa10.81□□□□□ -0.68
COL2A1-209ENST00000546974 RBMY1DP0C7P1 496 aaKnown RBP10.81□□□□□ -0.68
COL2A1-209ENST00000546974 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
COL2A1-209ENST00000546974 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
COL2A1-209ENST00000546974 F2RP25116 425 aa10.81□□□□□ -0.68
COL2A1-209ENST00000546974 PTBP1P26599 531 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL2A1-209ENST00000546974 ERVK-16P61578 105 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms