RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SUB1P53999 127 aaKnown RBP eCLIP4.42□□□□□ -1.7
PROM1-220ENST00000540805 ATP5J2P56134 94 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 RSPO1Q2MKA7 263 aaPredicted RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 KIAA1644Q3SXP7 199 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 CFAP161Q6P656 301 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 LHFPL4Q7Z7J7 247 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 MRPL30Q8TCC3 161 aaKnown RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 NABP1Q96AH0 204 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 ZNF488Q96MN9 340 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 MS4A5Q9H3V2 200 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 CCL28Q9NRJ3 127 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 PSENENQ9NZ42 101 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 ZNF835Q9Y2P0 537 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 DYSFO75923 2080 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 IGHV3-72A0A0B4J1Y9 119 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 IGKV1D-13A0A0B4J2D9 117 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 SH2D7A6NKC9 451 aaPredicted RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 ITGB1BP1O14713 200 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 TECTAO75443 2155 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 IGKV1-13P0DP09 117 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 PSG1P11464 419 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 GPR6P46095 362 aaPredicted RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 LRRC75BQ2VPJ9 315 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 PHYHD1Q5SRE7 291 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 PRR27Q6MZM9 219 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 SLC23A3Q6PIS1 610 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 FOXL2NBQ6ZUU3 175 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 GATAD1Q8WUU5 269 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 GPR146Q96CH1 333 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 BTF3L4Q96K17 158 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 WNT10AQ9GZT5 417 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 EML6Q6ZMW3 1958 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 KALRNO60229 2985 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 NCKAP5O14513 1909 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 A0A0G2JRQ6 117 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 PGPEP1LA6NFU8 196 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 ADH4P08319 380 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 SELENOTP62341 195 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 MDP1Q86V88 176 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 OR2M3Q8NG83 312 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 OR4F5Q8NH21 305 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 TMEM54Q969K7 222 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 OR4F4Q96R69 305 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 RNF2Q99496 336 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 HSD17B10Q99714 261 aaKnown RBP4.41□□□□□ -1.7
PROM1-220ENST00000540805 TRAPPC1Q9Y5R8 145 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 DSPP15924 2871 aaKnown RBP4.41□□□□□ -1.7
PROM1-220ENST00000540805 TMEM30CPA0ZSE6 113 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 C22orf46C9J442 243 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 J3KRW8 73 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 ZNF207O43670 478 aaKnown RBP4.41□□□□□ -1.7
PROM1-220ENST00000540805 SYNGR2O43760 224 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 CTXN2P0C2S0 81 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 SLC25A6P12236 298 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 RANP62826 216 aaKnown RBP4.41□□□□□ -1.7
PROM1-220ENST00000540805 LCN2P80188 198 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 FAM78BQ5VT40 261 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 Q6ZS49 121 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 ZNF826PQ6ZT77 177 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 ZNF295-AS1Q8N0V1 137 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 ST6GALNAC6Q969X2 333 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 WDR61Q9GZS3 305 aaKnown RBP4.41□□□□□ -1.7
PROM1-220ENST00000540805 SLC25A22Q9H936 323 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 GPR35Q9HC97 309 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 MANBALQ9NQG1 85 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 HILPDAQ9Y5L2 63 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 IGHV3-21A0A0B4J1V1 117 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 UBE2L5PA0A1B0GUS4 154 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 LRP5LA4QPB2 252 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 RAB29O14966 203 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 PGLYRP1O75594 196 aaPredicted RBP4.41□□□□□ -1.7
PROM1-220ENST00000540805 SCTP09683 121 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 GFRA1P56159 465 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 ATP6V1FQ16864 119 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 ASPHD1Q5U4P2 390 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 FAM214BQ7L5A3 538 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 UHRF2Q96PU4 802 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 MIEN1Q9BRT3 115 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 CSTL1Q9H114 145 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 WDR54Q9H977 334 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 HES4Q9HCC6 221 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 CACNG5Q9UF02 275 aa4.41□□□□□ -1.7
PROM1-220ENST00000540805 IGLV3-32A0A0A0MS00 114 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 CTXND1A0A1B0GTU2 59 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 hADV38S2A0JD32 116 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 ZNF785A8K8V0 405 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 F2RL2O00254 374 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 TNFSF13O75888 250 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 VENTXO95231 258 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 CELA3AP09093 270 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 CRYGSP22914 178 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 CHRNA7P36544 502 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 PTGDSP41222 190 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 LHX2P50458 406 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 TMEM183BQ1AE95 376 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 Q56UQ5 140 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 TMEM42Q69YG0 159 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 WFDC3Q8IUB2 231 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 WDR31Q8NA23 367 aa4.4□□□□□ -1.7
PROM1-220ENST00000540805 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms