RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 DVL1O14640 695 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 LY6HO94772 140 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 PPOXP50336 477 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 MORN2Q502X0 79 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF525Q8N782 197 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF645Q8N7E2 425 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 RCC1LQ96I51 464 aaKnown RBP14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 PSMG3Q9BT73 122 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 CACNG5Q9UF02 275 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 TRGV10A0A0A0MS01 117 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 F2RL2O00254 374 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 METTL15P1P0C7V9 234 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 IAPPP10997 89 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF16P17020 682 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 ARL16Q0P5N6 197 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 RAB24Q969Q5 203 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 P2RX4Q99571 388 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 AGMATQ9BSE5 352 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 PSG11Q9UQ72 335 aa14.05□□□□□ -0.16
PCDHB17P-201ENST00000539533 TRBV24-1A0A075B6N3 115 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 KBTBD11-OT1A0A1B0GTJ5 212 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 SYNGR2O43760 224 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 IGKV1-39P01597 117 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 IGKV1D-39P04432 117 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 C11orf71Q6IPW1 123 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 TMEM183AQ8IXX5 376 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 LEAP2Q969E1 77 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 PSENENQ9NZ42 101 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 CTSZQ9UBR2 303 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 CLN8Q9UBY8 286 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 JPT1Q9UK76 154 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 EREGO14944 169 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 OPN1MWP04001 364 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 OPN1MW2P0DN77 364 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 OPN1MW3P0DN78 364 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF134P52741 427 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 BTNL3Q6UXE8 466 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 HAPLN4Q86UW8 402 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 VAX2Q9UIW0 290 aa14.04□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF705GA8MUZ8 300 aaPredicted RBP14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 AMBPP02760 352 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 CYB5R2Q6BCY4 276 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 LSM10Q969L4 123 aaKnown RBP14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 ATG101Q9BSB4 218 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 LAMP3Q9UQV4 416 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 SPTAN1Q13813 2472 aaKnown RBP14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 CEBPZOSA8MTT3 80 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 YPEL1O60688 119 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 WNT2P09544 360 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 IGFBP2P18065 325 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 LINC00205P59089 165 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 RPL30P62888 115 aaKnown RBP14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 SERF2P84101 59 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 LRRC75BQ2VPJ9 315 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 BEND2Q8NDZ0 799 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 YPEL2Q96QA6 119 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 CTDSP1Q9GZU7 261 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 RAB1BQ9H0U4 201 aa14.03□□□□□ -0.16
PCDHB17P-201ENST00000539533 NDUFB3O43676 98 aa14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 MMP23AO75900 390 aa14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 G0S2P27469 103 aa14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 HBG1P69891 147 aa14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 HBG2P69892 147 aa14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 EIF4EBP1Q13541 118 aaPredicted RBP14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF585BQ52M93 769 aa14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 CORO2AQ92828 525 aa14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 YLPM1P49750 1951 aaKnown RBP14.02□□□□□ -0.16
PCDHB17P-201ENST00000539533 IGKV1-5P01602 117 aa14.02□□□□□ -0.17
PCDHB17P-201ENST00000539533 RPL31P62899 125 aaKnown RBP14.02□□□□□ -0.17
PCDHB17P-201ENST00000539533 TMEM41BQ5BJD5 291 aa14.02□□□□□ -0.17
PCDHB17P-201ENST00000539533 OR4X1Q8NH49 305 aa14.02□□□□□ -0.17
PCDHB17P-201ENST00000539533 RNASEH2CQ8TDP1 164 aaKnown RBP14.02□□□□□ -0.17
PCDHB17P-201ENST00000539533 ACTR3CQ9C0K3 210 aaPredicted RBP14.02□□□□□ -0.17
PCDHB17P-201ENST00000539533 ZNF462Q96JM2 2506 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 USF3Q68DE3 2245 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 hADV38S2A0JD32 116 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 MAP1LC3B2A6NCE7 125 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 IFNA1P01562 189 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 WDR25Q64LD2 544 aaPredicted RBP14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 ZBTB34Q8NCN2 500 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 H1FXQ92522 213 aaKnown RBP14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 MAP1LC3BQ9GZQ8 125 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 WDR61Q9GZS3 305 aaKnown RBP14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 RBKSQ9H477 322 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 KAAG1Q9UBP8 84 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 USP9XQ93008 2570 aaPredicted RBP14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 PROP1O75360 226 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 TNFRSF9Q07011 255 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 LRRC10Q5BKY1 277 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 DTX2Q86UW9 622 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 ZNF843Q8N446 348 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 OR10A7Q8NGE5 316 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 PINX1Q96BK5 328 aaKnown RBP14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 UBTD1Q9HAC8 227 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 LIN7CQ9NUP9 197 aaKnown RBP14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 LINC00312Q9Y6C7 94 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 MYO18BQ8IUG5 2567 aa14.01□□□□□ -0.17
PCDHB17P-201ENST00000539533 ELLP55199 621 aaPredicted RBP14□□□□□ -0.17
PCDHB17P-201ENST00000539533 PRAMEF5Q5TYX0 476 aa14□□□□□ -0.17
PCDHB17P-201ENST00000539533 TMEM200BQ69YZ2 307 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms