RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 AIREO43918 545 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 FCN3O75636 299 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TMEM50AO95807 157 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CYB5AP00167 134 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 IGKV2D-28P01615 120 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 IGLV1-51P01701 117 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 BPGMP07738 259 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 ERP29P30040 261 aaKnown RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 BMI1P35226 326 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CDKN2CP42773 168 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 NPBWR2P48146 333 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 GSSP48637 474 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 RAB9AP51151 201 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CDC42P60953 191 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 ADARB1P78563 741 aaKnown RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 FAM3AP98173 230 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 PRB3Q04118 309 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TNFRSF9Q07011 255 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 STX3Q13277 289 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TRAM2Q15035 370 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TMEM183BQ1AE95 376 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 RSPO1Q2MKA7 263 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 FAHD1Q6P587 224 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 RNASEKQ6P5S7 137 aaKnown RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CNIH2Q6PI25 160 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 IL34Q6ZMJ4 242 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 ACP7Q6ZNF0 438 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 SSX9Q7RTT3 188 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TRAPPC6BQ86SZ2 158 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 NAA40Q86UY6 237 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CYP4Z1Q86W10 505 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 ANGPTL5Q86XS5 388 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 NKAIN4Q8IVV8 208 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TMEM183AQ8IXX5 376 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 Q8IYB0 196 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 C4orf33Q8N1A6 199 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 DYNAPQ8N1N2 210 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 Q8N402 240 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TCTEX1D1Q8N7M0 179 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 C5orf56Q8N8D9 126 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 ASCC1Q8N9N2 400 aaKnown RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 OR10G4Q8NGN3 311 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 OR2T10Q8NGZ9 312 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.14□□□□□ -2.076e-13■■□□□ 14.1
SNHG1-202ENST00000535689 OR5P3Q8WZ94 311 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 GTF2H4Q92759 462 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 MAL2Q969L2 176 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TMEM106AQ96A25 262 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 REEP6Q96HR9 211 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 PKNOX2Q96KN3 472 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 PRSS27Q9BQR3 290 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 WFDC6Q9BQY6 131 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 COPS4Q9BT78 406 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 VCXQ9H320 206 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF331Q9NQX6 463 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CCL28Q9NRJ3 127 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CYTL1Q9NRR1 136 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 C19orf12Q9NSK7 152 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CD300AQ9UGN4 299 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 CYB5R1Q9UHQ9 305 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 TP53TG1Q9Y2A0 90 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 GOLT1BQ9Y3E0 138 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 LHFPL6Q9Y693 200 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 COMMD3-BMI1R4GMX3 469 aa2.14□□□□□ -2.07
SNHG1-202ENST00000535689 SRRM2Q9UQ35 2752 aaKnown RBP2.14□□□□□ -2.07
SNHG1-202ENST00000535689 HUWE1Q7Z6Z7 4374 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF729A6NN14 1252 aaPredicted RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 C11orf94C9JXX5 98 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 KRTAP4-16G5E9R7 235 aaPredicted RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 CXCR6O00574 342 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 NPPAP01160 153 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 RBMY1A1P0DJD3 496 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 NCK1P16333 377 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 CCL3L1P16619 93 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 F2RP25116 425 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 PAX6P26367 422 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 IL3RAP26951 378 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 PSMB8P28062 276 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 CD34P28906 385 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 IFNGR2P38484 337 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 GPR4P46093 362 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 OR1E2P47887 323 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SMIM11AP58511 58 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 SELENOWP63302 87 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 MRPS25P82663 173 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 PRDX4Q13162 271 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 MADCAM1Q13477 382 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 KRR1Q13601 381 aaKnown RBP2.13□□□□□ -2.07
SNHG1-202ENST00000535689 EBI3Q14213 229 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 GINS1Q14691 196 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 HLA-DRB5Q30154 266 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 DEFB136Q30KP8 78 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 TEX30Q5JUR7 227 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 GLYATL3Q5SZD4 288 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 ZNF684Q5T5D7 378 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 TPTE2P1Q5T6R2 138 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 OR2G6Q5TZ20 316 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 ERICH5Q6P6B1 374 aa2.13□□□□□ -2.07
SNHG1-202ENST00000535689 C10orf99Q6UWK7 81 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms